Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2910 |
Symbol | |
ID | 4185078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3327870 |
End bp | 3328949 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638072897 |
Product | transcriptional regulator |
Protein accession | YP_679494 |
Protein GI | 110639285 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.246584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCAGTA AAACCGTAAC TCGTACTTTT ATAAATGAAA TTTCACCCCA TATTGATATG CCGATTAATA AATTAGCTCT GGTCAGATAC AAAACAATTG ATTCCTGCCT ACAGAACCGG TTCCGCAAAT GGACACTGGA AGACTTAATG GAAGCATGCT CCGATGCCTT GTATGAATAT GAAGGTATGA CAAAAGGCAT CAGCAGACGT ACCATACAAC TCGACATACA AAATATGCGC AGCGAAAAGC TCGGGTATAA CGCGCCGATT ATCGTAACAG ATAAAAAATT TTACAGCTAC GAAGACAAAG GATACAGCAT TACCAATTCC CCGTTAACGC AACAGGATCT GGGCACATTG GTTGAAGTGC TGGATGTATT GAAGCAGTTT AAAGGCTTTG GGTATTTTCA GGAATTAACC GGCATGGTTA CGCGGCTGGA AGATAAATTA TATACGCACC AGCATAAAGG AAAATCCTAT ATCGATTTTG AAAAGAACGA ATTACTGAAA GGACTGCAGC ACATAGATCT GCTTCATAAA GCCATCATCA ACAAAAAAAC GGTTGATATT TTATATCAAT CGTTTAAGGC TGCATCAGCA CAAAATATAA CATTCTATCC ATATTTGTTA AAAGAGTACC GCAACCGCTG GTTTATACTT GGCTGCAACA AACGTACGAA AGCAACAATG ATCCTGGCAC TGGATCGTAT CGAACAGTTT AAGGAACTGC GTTCAGAGAA ATACATGAAA CCGGATTTTG ATGTCGCCAC TTATTTTGAT GATGTAATTG GTGTTTCTAA AATGCCAAAT CAGGAACCGC AATTGATTGT ATGTAAAATC AGTAAAGAAC ATGCGCCCTA TATTATAACC AAACCCATAC ATGCTTCACA GCAGATTATA CGCGGGGAAA AAGACGGAAC AGTGTTTTCC ATTCATGTAA TCTGGAATTT TGAACTGGAA CGGGAGCTGC TTGGTTTTGG CGAACAGCTT CAGGTATTGG CACCGAGAAG AATTCAGGGT AAATTAAGGG CCAGAATGAA ACGCGCTGTT GCAGCGTACG AATCTGAAAA AAAAGAATAA
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Protein sequence | MRSKTVTRTF INEISPHIDM PINKLALVRY KTIDSCLQNR FRKWTLEDLM EACSDALYEY EGMTKGISRR TIQLDIQNMR SEKLGYNAPI IVTDKKFYSY EDKGYSITNS PLTQQDLGTL VEVLDVLKQF KGFGYFQELT GMVTRLEDKL YTHQHKGKSY IDFEKNELLK GLQHIDLLHK AIINKKTVDI LYQSFKAASA QNITFYPYLL KEYRNRWFIL GCNKRTKATM ILALDRIEQF KELRSEKYMK PDFDVATYFD DVIGVSKMPN QEPQLIVCKI SKEHAPYIIT KPIHASQQII RGEKDGTVFS IHVIWNFELE RELLGFGEQL QVLAPRRIQG KLRARMKRAV AAYESEKKE
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