Gene CHU_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2910 
Symbol 
ID4185078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3327870 
End bp3328949 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content40% 
IMG OID638072897 
Producttranscriptional regulator 
Protein accessionYP_679494 
Protein GI110639285 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.246584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCAGTA AAACCGTAAC TCGTACTTTT ATAAATGAAA TTTCACCCCA TATTGATATG 
CCGATTAATA AATTAGCTCT GGTCAGATAC AAAACAATTG ATTCCTGCCT ACAGAACCGG
TTCCGCAAAT GGACACTGGA AGACTTAATG GAAGCATGCT CCGATGCCTT GTATGAATAT
GAAGGTATGA CAAAAGGCAT CAGCAGACGT ACCATACAAC TCGACATACA AAATATGCGC
AGCGAAAAGC TCGGGTATAA CGCGCCGATT ATCGTAACAG ATAAAAAATT TTACAGCTAC
GAAGACAAAG GATACAGCAT TACCAATTCC CCGTTAACGC AACAGGATCT GGGCACATTG
GTTGAAGTGC TGGATGTATT GAAGCAGTTT AAAGGCTTTG GGTATTTTCA GGAATTAACC
GGCATGGTTA CGCGGCTGGA AGATAAATTA TATACGCACC AGCATAAAGG AAAATCCTAT
ATCGATTTTG AAAAGAACGA ATTACTGAAA GGACTGCAGC ACATAGATCT GCTTCATAAA
GCCATCATCA ACAAAAAAAC GGTTGATATT TTATATCAAT CGTTTAAGGC TGCATCAGCA
CAAAATATAA CATTCTATCC ATATTTGTTA AAAGAGTACC GCAACCGCTG GTTTATACTT
GGCTGCAACA AACGTACGAA AGCAACAATG ATCCTGGCAC TGGATCGTAT CGAACAGTTT
AAGGAACTGC GTTCAGAGAA ATACATGAAA CCGGATTTTG ATGTCGCCAC TTATTTTGAT
GATGTAATTG GTGTTTCTAA AATGCCAAAT CAGGAACCGC AATTGATTGT ATGTAAAATC
AGTAAAGAAC ATGCGCCCTA TATTATAACC AAACCCATAC ATGCTTCACA GCAGATTATA
CGCGGGGAAA AAGACGGAAC AGTGTTTTCC ATTCATGTAA TCTGGAATTT TGAACTGGAA
CGGGAGCTGC TTGGTTTTGG CGAACAGCTT CAGGTATTGG CACCGAGAAG AATTCAGGGT
AAATTAAGGG CCAGAATGAA ACGCGCTGTT GCAGCGTACG AATCTGAAAA AAAAGAATAA
 
Protein sequence
MRSKTVTRTF INEISPHIDM PINKLALVRY KTIDSCLQNR FRKWTLEDLM EACSDALYEY 
EGMTKGISRR TIQLDIQNMR SEKLGYNAPI IVTDKKFYSY EDKGYSITNS PLTQQDLGTL
VEVLDVLKQF KGFGYFQELT GMVTRLEDKL YTHQHKGKSY IDFEKNELLK GLQHIDLLHK
AIINKKTVDI LYQSFKAASA QNITFYPYLL KEYRNRWFIL GCNKRTKATM ILALDRIEQF
KELRSEKYMK PDFDVATYFD DVIGVSKMPN QEPQLIVCKI SKEHAPYIIT KPIHASQQII
RGEKDGTVFS IHVIWNFELE RELLGFGEQL QVLAPRRIQG KLRARMKRAV AAYESEKKE