| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2892 |
|---|
| Symbol | wcaL |
|---|
| ID | 4184482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 3306295 |
|---|
| End bp | 3307524 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638072881 |
|---|
| Product | a-glycosyltransferase |
|---|
| Protein accession | YP_679480 |
|---|
| Protein GI | 110639271 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0000152395 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0283298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA TTCTGGCAAC AGCTTATGCA ATCAATCCAT ACAAAGGTTC AGAAGATGGA
ACAGGGTGGA ATCTTGTTGG CCAGATTGCA CGGTTCAATA AAGTTGTTGT TGTCACGAGA
GAAAATAATC AAGAGTCAAT AGAAAAATAT TTGAGTGAAT ATCCTGATTC AATTCATAAG
AATATAAAAT TTTTGTATTT CGACTTACCA TATTGGATGC GTTTCTGGAA GAAAGGGGAA
AGAGGTGCCA TGCTTTATTT TTATCTGTGG CAGTTTTTTA TGCCATACTT TATAAAAAAA
TCTAACGTTC ATTTTGACAT TCTTCATAAT CTGAATTTTC ATAACGACTG GACACCAACC
TTTTTATGGA AACTCAATAA ACCATTGGTA TGGGGACCAA TAGGCCATCA TCCCAAAGCA
CCGTCAGAGT ATGTTTATAA GCCTTATGGA AGGATTGAAT ATTTAAAGAG CAGAATTTTA
TGGGTTGTGA AAAATCTATT TTGGAAATGT GATCCCTTTC TGGGTATTGC ATTAAAAAAG
GCTGACAAAA TCATTTGTAT GAATAGTGGT GTTGAGAAAG TTCATAAAAT ACCAGCAGGA
AAAGTGGTAC GAATGTGTGC AGTAAGTTCA GATTCGAATG CCACATGTGT ACTTAATGAT
TCAAGTATGT TTTCTATTTT ATCTGTCGGC AGGCTTGTTC CTTTAAAAGG GTTCGATATA
ACTTTGAAGG CTTTTCATGT ATTCTTTAAT ACATTATCCG GTGAACAAAA AAAGTGTGTT
CAGCTTCATT TGGTTGGAAA AGGACCTTTG TTGAATTTCT TAAAAAATGA AATTAAGGTT
TTAGGTTTAG AAAATGCTGT GTTGATTACG GAGTGGGTAG AGAAAGAAAA AATGAAAGAT
ATTTATACCA ATGCATCTGT ATTTCTTTTC CCCTCACATG AAGGCGCAGG TATGGTTGTG
CCAGAAGCAC TCTCTTATGG TTTACCTGTA ATTTGTTTCG ATAATGAGGG GCCCGGTGAA
TTCATCGATT CAAGCTGTGG CTTAAAAGTG CCCTACTCAA ATTATTCAAA TTCAGTTGAA
GCGTTTTCAA AACAATTAGG TTTGCTTTTT CAGGATAGTA ACTTATATAG AGATTTATCT
ATTGGCGCTT TAAAAACGTT TAATTCTACT TTCGATTGGA ACATCAAAGG AGATATTTTA
AGGGATGTGT ATAATTCATT AAAGAATTAA
|
|---|
| Protein sequence | MKTILATAYA INPYKGSEDG TGWNLVGQIA RFNKVVVVTR ENNQESIEKY LSEYPDSIHK
NIKFLYFDLP YWMRFWKKGE RGAMLYFYLW QFFMPYFIKK SNVHFDILHN LNFHNDWTPT
FLWKLNKPLV WGPIGHHPKA PSEYVYKPYG RIEYLKSRIL WVVKNLFWKC DPFLGIALKK
ADKIICMNSG VEKVHKIPAG KVVRMCAVSS DSNATCVLND SSMFSILSVG RLVPLKGFDI
TLKAFHVFFN TLSGEQKKCV QLHLVGKGPL LNFLKNEIKV LGLENAVLIT EWVEKEKMKD
IYTNASVFLF PSHEGAGMVV PEALSYGLPV ICFDNEGPGE FIDSSCGLKV PYSNYSNSVE
AFSKQLGLLF QDSNLYRDLS IGALKTFNST FDWNIKGDIL RDVYNSLKN
|
|---|
| |