Gene CHU_2781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2781 
Symbol 
ID4186270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3170389 
End bp3171525 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content41% 
IMG OID638072770 
Producta-glycosyltransferase 
Protein accessionYP_679372 
Protein GI110639163 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.27166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGCGTA GTACAATAGT AGTTTCAGTA ACAACCGATC TGGTAACCGA CCAGCGGGTA 
TACAAAGTGT GTAACAGTCT TTATACAAAC GGCTATACTA TTTTATTAGT TGGAAGAAAG
AAAAAAGACA GCATGGTGAT GGATAAGCGC CCGTATAAAA CACACCGCTT TAATTTATGG
TTTGAAAAGG GCCCCTTATT TTATGCGCAG TATAACCTGT ATCTGTTTTT CTATTTACTG
TTCCACAAAG CAGATATTTA TTTAGCGAAT GATCTCGATA CCTTGCTGCC AAATTACCTG
GTATCGAAAA TTAAAGGTGT GCCGCTGGCA TATGATAACC ACGAATATTT TACAGGTGTT
CCTGAACTGA TCAAACGGCC GAAGATACAG AAGATCTGGA AAAGCATTGA AAACTGGATT
TTCCCGAAGG TTAAATACAT TTACACCGAT AATTTTGCCA AGCGAAGTTT ATTTGTAGAA
GAATTCAAGC AGCCGGTAGA AGTTGTTATG AACGTACCGA TCCTGCAGGA AACACCAGTT
GATGCCCGGT ACAGATTAGA AGGGGTAGAA AATAAATTCA TACTCATCTA TCAGGGAACA
GGTATCAACG TGGCACGCGG AACGGAAGAA CTGACACTTG CCATGAAATA TCTGGACGAA
CGTTTTTTAC TGTTGTTTGT AGGCAGCGGC GATGTGATTG ATGTATTAAA GGCACTTGTA
AAAGAACATG CCTTGGAAAA CAAGGTACGT TTTGTGCCTA AAGTACCGCA CCATGTATTG
AAACAATATA CCATGCAGGC ACACTTAGGT ATTACTGTAG ATAAACCCAT CAGCGAAAAT
TATATTTACA GCTTTCCCAA TAAAGTGTTT GATTATGTAC ATGCAGGTGT GCCTGTGCTT
GCTTCACGTT TGCAGGAAGT AGAACGTATT ATGAATCTGT ACGGGATCGG TACATTTGTT
GATTCCTATG AGCCGGAGCA CATTGCAGCA CGCATCCAAT GGATCCACGA TAACCCGGAA
CAGTACGCGG TATGGAAAGA GAATCTGGTA CATGCAGCAA AAGAAATAAA CTGGCAGCAG
CAGGAAAAAA TATTGCTGGG GATTTATCAA CGCATTAAAG AGGAAAATGG ACTGTAG
 
Protein sequence
MMRSTIVVSV TTDLVTDQRV YKVCNSLYTN GYTILLVGRK KKDSMVMDKR PYKTHRFNLW 
FEKGPLFYAQ YNLYLFFYLL FHKADIYLAN DLDTLLPNYL VSKIKGVPLA YDNHEYFTGV
PELIKRPKIQ KIWKSIENWI FPKVKYIYTD NFAKRSLFVE EFKQPVEVVM NVPILQETPV
DARYRLEGVE NKFILIYQGT GINVARGTEE LTLAMKYLDE RFLLLFVGSG DVIDVLKALV
KEHALENKVR FVPKVPHHVL KQYTMQAHLG ITVDKPISEN YIYSFPNKVF DYVHAGVPVL
ASRLQEVERI MNLYGIGTFV DSYEPEHIAA RIQWIHDNPE QYAVWKENLV HAAKEINWQQ
QEKILLGIYQ RIKEENGL