Gene CHU_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2731 
Symbol 
ID4185261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3115330 
End bp3116598 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content32% 
IMG OID638072721 
Producttwp-component sensor histidine kinase 
Protein accessionYP_679323 
Protein GI110639114 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA CAGCGAAAAG CTCAATTTAT TATTTAATTT ATACGTTATT TATTTTTACG 
ATAGGTACGG TATTATTTTA TTTTTTAATC CGTAATGTTC TTTTCAATGC AATTGATGAG
GCCTTGCATC AGGAAAAAGA TCAGGTAATT GAAAACCTGA GATATGAAAA AGAATTCAAG
GAAATTCAGA ACAGTGATTT TATCGAAATT ATTCAGGTAG GGAAGGATAG TAAAGTATAC
GACCGGTTTT ATACCATAAG TATATATAAT TCTAAACGGA AAGAAAATAT TGATTACAGA
GAATTGAAAA GTGTCTACAA ACACGGTGAT AATTTTTATG AGATCACAAT CAGGCAACCG
CTTTCAGAGG CTGAATCCCT TATCAATTCT ATTCTTCCGA TTGAAGTGGC TTTGTTTTTC
GGTTTAATTG TTGGAGTACT TTTAATTAAC CGGTTTATTT CAAATAAAAT CTGGCAGCCT
TTTTATGATT TGGTTGAACG GTTAAAAAAT TATGATCTGG TAAACATTAA AATCATTCCA
TATTACAAAT CGAATGTGGA TGAATTTGAT GAATTGAGTG AGAGTGTAGA AAAAATGACT
ACCAGAATAT ATAAAGATTT TAACAGTCAG AAAGAGTTTA ATGAAAATTC TTCACACGAA
CTGCAAACAC CGTTAGCCAT TATCCGCAAT AAGTTAGAAC TACTGATCCA ATCTAAAAAC
CTGAAAGATG AAGACATGGT TCTGATTGAA TCTGTTTTCT ATACCATCAA CCGGCTTACC
CAGTTGAATA AGGGCTTGAT CTTACTTTCT AAAATTGAAA ATAATCAATA CAGTGAGCTG
ACCAGAATTA ATATCGGGCA GCTGCTTGAA ACACTTTTAA TAAGTTTTGA AGAATTAATA
AATGAACGCA ACATTATCGT TCAGCTCAAT ATTTTAAAAG TAATCATCAT ACCGGCGAAT
CAGATTTTAA TTGAGACCTT ATTTTTCAAC TTAATCTCAA ACGCGATTAA GCATAACATT
GAAGATGCCG GTACAATAAC AATTACGCTT TCAAAAGATA TGTTAGAAAT CTCAAATACC
GGAAACGAAT TGCCGGTAGA AGCAGAACGT ATGTTTGAAC GGTTTTTAAA AAGCTCTACT
TCCGAAATGT CTGTGGGTCT TGGCTTATCT ATTGTCAAAA AAATATGCGA TTTATATAAA
TTTAAAATAT CGTATACCTG TGTGAATAAA ATACATACAA CCCGTATTGA ATTTTCACCA
CCTGCCTGA
 
Protein sequence
MKLTAKSSIY YLIYTLFIFT IGTVLFYFLI RNVLFNAIDE ALHQEKDQVI ENLRYEKEFK 
EIQNSDFIEI IQVGKDSKVY DRFYTISIYN SKRKENIDYR ELKSVYKHGD NFYEITIRQP
LSEAESLINS ILPIEVALFF GLIVGVLLIN RFISNKIWQP FYDLVERLKN YDLVNIKIIP
YYKSNVDEFD ELSESVEKMT TRIYKDFNSQ KEFNENSSHE LQTPLAIIRN KLELLIQSKN
LKDEDMVLIE SVFYTINRLT QLNKGLILLS KIENNQYSEL TRINIGQLLE TLLISFEELI
NERNIIVQLN ILKVIIIPAN QILIETLFFN LISNAIKHNI EDAGTITITL SKDMLEISNT
GNELPVEAER MFERFLKSST SEMSVGLGLS IVKKICDLYK FKISYTCVNK IHTTRIEFSP
PA