Gene CHU_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2717 
Symbol 
ID4185247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp3104037 
End bp3104405 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content39% 
IMG OID638072707 
ProducttonB-related protein 
Protein accessionYP_679309 
Protein GI110639100 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00561368 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TCCTATTTGT TCTAGCTATC AGCCTGGTTG CTTTTATTTC TTATAAAGAA 
ATTCAGGCAC AAACAGCTCC TACTAAAGTT GTTCCGGCAG CTCAATATTA TGAAGGAGGC
CAAACAGCTA TGTATGAATT TATTAATTCA CATGTTTTGT ATCCGGCCGT AGCAAAAAGA
AACAGAATTC AGGGAGAATG CATCATTGGC GGTGTATTAG AAGCTGACGG TACAATGACC
AATGTAACAG TTGTAAAAAA CATTGGCGGC GGTTGCGGTG AAGAAGCGGC ACGTGTAGTA
AAGTTATTGA AATTCCGTGC ACCGGGTTTT AAATCTCAAA CCAGCATACC CGTATATTTC
AAATTATAA
 
Protein sequence
MKQFLFVLAI SLVAFISYKE IQAQTAPTKV VPAAQYYEGG QTAMYEFINS HVLYPAVAKR 
NRIQGECIIG GVLEADGTMT NVTVVKNIGG GCGEEAARVV KLLKFRAPGF KSQTSIPVYF
KL