Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2697 |
Symbol | ydgG |
ID | 4184565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 3083463 |
End bp | 3084578 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638072688 |
Product | transport protein |
Protein accession | YP_679290 |
Protein GI | 110639081 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0215163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA CCGTATTATT CCGTATAACC CTTCTATTGG TATTTGTCTT TTTATTGGTC GTGGGAATGA TTTATGCGAA AGCATTTCTT GTGCCTGTAT TTTTTGCAGG CCTGCTATCT TTACTACTGC TGCCTGTATC AAAAAAAATT CAGAAATTCA TTCCGAATGA GGTATGCTCC ATCATTTTAT CGCTGGTGCT TTTTCTGATT ATAATCTGCA GCGTCAGTTA TTTTATCTCC ACACAGGTTT CTAACATCAT TTCAGATTAT GATATGATTG AAAGCAAGAT AAAAACAAAA GCACATGCCT TGCAGGCAAC AGTGAATGAG TATACAGGCA TGGATGAAAA GGAACAGGAA GCCTGGTTTG ATAAAGAGTC TGAACAGTTA TTAAAATCGG GTTTCCAGAA AGGCACAACC CTTTTGGTTG GAGTAGGTAA CTTTGTATTC GGCCTTACAC TTGTAATGAT CTATACCTTC TTCCTGCAGC TTTACAGAGG AAAGATCAAA TTGTTTATTT TATCGCTGAT TGATGAACAA CAACATGAAA AAGCATTATC GATACTGAAC AAAGTACAAT CACTGGTTAT GCATTATATA ACCGGCCTGT GTATTGCCTT ATCAATTATT GGTGTGATGA ATGCGGTTGG TTTAACACTT TTAGGTATTG AACATGGTAT TTTCTTAGGC TTACTGGCAG GTTTTTTAAA TATCATTCCT TACATCGGTT CTTTTGTTGG TGCAGGCTTA CCGATGATCA TGGCATTGAT CTATAAAGAT TCGCTTTGGT ATCCGGTCGG TGTATTGGCC ATTTTTATGT TCAACCAGTT TATTGATAAC AATATTACTA CACCAAATGT AGTTGGTGGT TATGTGCGCC TCAATTCGCT TGCAACTATT TTCATTGTTA TTATTGGCGG TATGATCTGG GGAGTTGCAG GTATGGTTTT ATTCATCCCG CTGTTAGGCA TTTTCAAAAT CTTCTGTGAT CATATTGAAG CGCTGAAACC GCTAAGTATT CTGCTGAGTG ATGATGAAAG TGAAGAAGAG AGTTTCTTCA CTAAAACGTT TAAAAAAATA AAAATGAAAT TATTTAAAAA GAAGATTACC AGCTAA
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Protein sequence | MKQTVLFRIT LLLVFVFLLV VGMIYAKAFL VPVFFAGLLS LLLLPVSKKI QKFIPNEVCS IILSLVLFLI IICSVSYFIS TQVSNIISDY DMIESKIKTK AHALQATVNE YTGMDEKEQE AWFDKESEQL LKSGFQKGTT LLVGVGNFVF GLTLVMIYTF FLQLYRGKIK LFILSLIDEQ QHEKALSILN KVQSLVMHYI TGLCIALSII GVMNAVGLTL LGIEHGIFLG LLAGFLNIIP YIGSFVGAGL PMIMALIYKD SLWYPVGVLA IFMFNQFIDN NITTPNVVGG YVRLNSLATI FIVIIGGMIW GVAGMVLFIP LLGIFKIFCD HIEALKPLSI LLSDDESEEE SFFTKTFKKI KMKLFKKKIT S
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