| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2689 |
|---|
| Symbol | metG |
|---|
| ID | 4186753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3074386 |
|---|
| End bp | 3076455 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638072681 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_679283 |
|---|
| Protein GI | 110639074 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.404037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACA AACCATCCAG ATATACCATT ACCTCTGCCC TCCCGTATGC CAACGGTCCG
GTCCACATCG GCCATTTGGC GGGTGTGTAT GTACCCGCGG ATATTTATGC GCGTTTTTTA
CGTTCAAAAG GAGAAAATGT ATTGTTTATC GGCGGTTCAG ACGAACATGG TGTACCCATT
ACCATCCGTG CAAAAAAAGA AGGCGTTACA CCGCAGCAGG TGGTAGACAA ATACCACGTA
CAGATCAAAC AATCGTTTGA AGAACTGGGA ATCTCGTTTG ATATCTATTC CAGAACCTCT
TCAAAGATCC ATGCGGAAAC GTCTTCCGAA TACTTCAAAA AATTATATGA AGATGGAAAG
TTCATTGAAC AGACCAGCGA ACAATACTAC GATCCGAAAG CAGAACAATT CCTGGCAGAC
AGATACATCA TCGGCACCTG TCCGAAGTGC GGCAACGAAA ACGCATACGG CGATCAGTGC
GAGAAATGCG GTTCAACCTT AAGTCCGTCT GAACTGATCA ATCCGCGCTC TACACTTAGC
GGTGAGAAGC CCGTAATGAA ATCAACCAAA CACTGGTTCC TGCCATTGGA TCAATACGAA
CCTTGGTTGA AACAATGGAT CTTAGAAGAT CATAAAAACT GGAAGACCAA TGTATACGGT
CAATGCAAAT CCTGGCTGGA TCAGGGCCTG CAGCCCCGTG CCGTTACACG CGATTTAGAC
TGGGGTGTAC CTGTACCTGT TGCCGGTGCC GAAGGCAAAG TATTGTATGT ATGGTTTGAT
GCACCGATCG GTTACATCTC TGCAGCAAAA GATTATTTCA AAAATTCTGA AATTAAAGCC
GTTCATAAGA ATAATACCTG GGAAGATTTC TGGAAGAAAG ACGATACCAA GCTGGTACAC
TTTATCGGTA AAGACAACAT CGTGTTCCAT TGCATCATCT TCCCTGCTAT GTTAAAGGCA
GAAGGAAGTT ACATACTTCC GGACAACGTG CCTGCAAATG AGTTCATGAA TTTAGAAGGC
GATAAAATTT CTACTTCACG TAACTGGGCC GTTTGGCTGC ATGAATATCT GGAAGAATTC
AAAGGCAAAC AGGACGTATT GCGTTATGCC TTATGTGCGA ATGCTCCGGA AACAAAAGAC
AACGATTTTA CCTGGCGGGA TTTCCAGGCG CGCAACAACA ATGAACTGGT TGCGATCTAC
GGAAACTTTG TAAACCGTGC GTTGGTATTG ACACATAAAT ATTATGACAG CGTAATTCCT
GCTTTAGGAA AGCTTGAAGC TTCGGACGAA GGTGTAATCA TGATGCTGAA AGAATTTCCG
GCGAAGATCG CTGCATCGAT CGAGCAGTAC CGTTTCCGTG AAGCACTTGG TTTCATGATG
GACCTGGCAC GTTTGGGAAA TAAATATTTA GCCGATACCG AACCGTGGAA GATCTACAAA
GAAAATCCCG AACGCGTAAA AACGATTTTA CACATCGGCT TACAGATCGC AGCGAACTTA
GCAATCGTTT CTGAACCCTT CATTCCGTTT ACATCGGCAA AATTATTTAC GATGCTAAAC
CTGAAAGCAA ACACCTGGAA CAATGCGGGC ACAATCGACT TGTTAAAAGC AGGTGATCAG
TTAGGCACAG CAGAGTTGTT GTTTGATAAA ATTGAAGATG CAACCATTGA AGCACAGGTA
AAAAAACTGG AAGATACCAA ACAGGCAAAC TTGCTTGCGA ACGCGGAAGT AAAACCATTG
AAAGAAAATG TTTCTTTTGA TGACTTTGCC AAAATGGATA TTCGTGTAGC AACGATCATT
GCAGCAGAGA AAGTAGCGAA GACAAAAAAA TTATTAAAGC TTACGCTAAA AACTGGTATC
GACGAACGCA CGGTAGTAAG CGGCATTGCC GAACACTTCG AACCGGAAGC GATCATCGGT
CAGCAGGTAT CCTTACTTGC CAACCTTGCG CCACGTGAGA TTAAAGGCAT CGTATCTCAG
GGTATGATCT TAATGGCTGA AGATGCAGAT GGTTCGTTGA AATTTGTCCA ACCGGCGGCG
GTGGTGAATG CGGGCAGTAT GATTGGATAA
|
|---|
| Protein sequence | MTNKPSRYTI TSALPYANGP VHIGHLAGVY VPADIYARFL RSKGENVLFI GGSDEHGVPI
TIRAKKEGVT PQQVVDKYHV QIKQSFEELG ISFDIYSRTS SKIHAETSSE YFKKLYEDGK
FIEQTSEQYY DPKAEQFLAD RYIIGTCPKC GNENAYGDQC EKCGSTLSPS ELINPRSTLS
GEKPVMKSTK HWFLPLDQYE PWLKQWILED HKNWKTNVYG QCKSWLDQGL QPRAVTRDLD
WGVPVPVAGA EGKVLYVWFD APIGYISAAK DYFKNSEIKA VHKNNTWEDF WKKDDTKLVH
FIGKDNIVFH CIIFPAMLKA EGSYILPDNV PANEFMNLEG DKISTSRNWA VWLHEYLEEF
KGKQDVLRYA LCANAPETKD NDFTWRDFQA RNNNELVAIY GNFVNRALVL THKYYDSVIP
ALGKLEASDE GVIMMLKEFP AKIAASIEQY RFREALGFMM DLARLGNKYL ADTEPWKIYK
ENPERVKTIL HIGLQIAANL AIVSEPFIPF TSAKLFTMLN LKANTWNNAG TIDLLKAGDQ
LGTAELLFDK IEDATIEAQV KKLEDTKQAN LLANAEVKPL KENVSFDDFA KMDIRVATII
AAEKVAKTKK LLKLTLKTGI DERTVVSGIA EHFEPEAIIG QQVSLLANLA PREIKGIVSQ
GMILMAEDAD GSLKFVQPAA VVNAGSMIG
|
|---|
| |