| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2664 |
|---|
| Symbol | nudC |
|---|
| ID | 4185883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 3048370 |
|---|
| End bp | 3048855 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638072657 |
|---|
| Product | NUDIX hydrolase family protein |
|---|
| Protein accession | YP_679259 |
|---|
| Protein GI | 110639049 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.472799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAA TAAAAAACGG AATCATCCAC AGTTTTGGTA ACAAGCTACG TATCAGAGTA
TGCGGCATCT GCATGGACGA TAATAAAATT TTATTGGTGA AACATCATTC GCTGGGGGAA
AGCGGAATTT TATGGGCTCC ACCAGGCGGA GGCATCTCTT TCGGCGAAAC AGCTGAAGAA
GCATTAAAAA GAGAATTTTT AGAAGAAACC GGACTATCTG TCTCCATCGA AAAGTTTTTG
TGTGTCAATG AATATTTAAG TCTGCCGCTG CATGCCATTG AATTATTTTT CCTTGTAAAA
ACTACAGGTA CACTCAAACT AGGTACAGAT CCTGAGCTGC AGGCAAACCA GCAGATTATA
ACAGACGTTG AATGGCTTTC TATTGATGCG CTTCAATTGC TCCCGAAAAA TTCTATACAT
GGAATTTTAC ATAACATACA GGCATCTGCA GATGTGCTGC ATTTATCCGG TTATTTTAAT
TATTAA
|
|---|
| Protein sequence | MEEIKNGIIH SFGNKLRIRV CGICMDDNKI LLVKHHSLGE SGILWAPPGG GISFGETAEE
ALKREFLEET GLSVSIEKFL CVNEYLSLPL HAIELFFLVK TTGTLKLGTD PELQANQQII
TDVEWLSIDA LQLLPKNSIH GILHNIQASA DVLHLSGYFN Y
|
|---|
| |