| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2628 |
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| Symbol | kduD |
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| ID | 4185415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 3009641 |
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| End bp | 3010516 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638072620 |
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| Product | 2, 4-dienoyl-CoA reductase (NADPH)-related protein |
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| Protein accession | YP_679222 |
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| Protein GI | 110639013 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.346863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTAA ATTTATTCAA ACCTATGCTT CAGGCAGAAG CATTTAAAAA TAAAGTTGTC
GTTGTTACGG GCGGCGGAAC AGGCCTGGGA AAAAGCATGG CACAAATGCT GTTGCAGCTG
GGTGCAAATG TTGTTATTAC GAGCAGAAAA TTAGAGGTAT TGGAAGCAGC AGCGAAAGAA
CTCGAAACCT TAACCGGCGG CAGTGTATTG GCAGTTGCCT GTGATGTACG GGACTACAGG
CAGGTAGAAG AATTGCTGCA AAAGTCTGTT GCCCGTTTTG GCCGTGTAGA TGCCTTGCTG
AACAACGCTG CGGGAAATTT TGTAAGCCCG ACAGAAAATC TTTCACCAAA AGCATTTGAT
GTTGTTGTTG ATATTGTTTT AAAAGGAACA TACAATTGTG TGCTTACGTT TGGAAAATAC
TGGATAGATA ATCAGATTCC GGCAACGGTA TTAAGCATTG TTACTACGTA TGCCACTACG
GGCTCTGGAT ATGTGGTACC TTCAGCATGC GCAAAAGCTG GGGTAATTGC ATTAACCAGG
TCACTGGCGG TGGAATGGGC GAAATACAGC ATCCGCTTTA ATGCCATTGC ACCCGGACCG
TTTCCTACAG AAGGAGCCTG GAGCCGTTTG TTCCCCGGAC AGATTGCAGA ATTATTTGAG
CCTGGCAACC GTATTCCCTT AAAACGTTTT GGTAAACACG AAGAACTCGC CAATCTATCG
TCCTATTTAC TTTCTGAATA TTCGGCTTAT ATGACTGGAG AAGTTGTAAC GATTGATGGG
GGAGAATGGC TGAAAGGTGC AGGGGAGTTT AACGGCCTGG ATGTGGTGAG TAAGGAAGAA
TGGGCCGAAA TTGAACGCAG TATCCGTGGA AAATAA
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| Protein sequence | MELNLFKPML QAEAFKNKVV VVTGGGTGLG KSMAQMLLQL GANVVITSRK LEVLEAAAKE
LETLTGGSVL AVACDVRDYR QVEELLQKSV ARFGRVDALL NNAAGNFVSP TENLSPKAFD
VVVDIVLKGT YNCVLTFGKY WIDNQIPATV LSIVTTYATT GSGYVVPSAC AKAGVIALTR
SLAVEWAKYS IRFNAIAPGP FPTEGAWSRL FPGQIAELFE PGNRIPLKRF GKHEELANLS
SYLLSEYSAY MTGEVVTIDG GEWLKGAGEF NGLDVVSKEE WAEIERSIRG K
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