Gene CHU_2605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2605 
Symbol 
ID4186149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2984289 
End bp2985320 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content37% 
IMG OID638072597 
Producthypothetical protein 
Protein accessionYP_679200 
Protein GI110638991 
COG category 
COG ID 
TIGRFAM ID[TIGR03519] Bacteroidetes-specific putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAAATA TATCAGTTAG ATTATTTTAT ACTATACAAA TGAAATTTAT AAGCACTTTT 
TGTGTATTGG TTTTTATTCA TACAATATCC ATAGCACAAG ATATTCATCT TACACAATAC
TACACATCCA ATCTTTCATT AAACCCTGCA TATACAGGGA ACTTTGACGG AGATCTGAAA
GTAGTTGCCA ATTCCAGAAG TCAGTGGTCA CAAATTTCTC CCTCCATGAA AACGAATATG
ATTTCAGTAG AGAAGAAATT TTTAAAACGC CCCGATGAAT TTGGCTTAGG ATTGATCCTG
ATCAATGATC AGGTAAGTTC TTATTTTTTA CACACGAATA AAATATACAT TTCCGGAAGT
TATCAGAAAA ATTACAAGGG CCATTTATTG CGTTTTGGTG TGCAATCCGG AATTGTAATG
AGAAATATCA ATACCAATGA CCAGACATTT CCTAGCCAGT GGGATTACCA GCTTGGTGCT
TATGATCCTA CAGCTAATTC AAATGAAGGA TCTGTAAAAA ACAGCTGGAA TTATATCAAT
GTAAATGCAG GAGTTGGCTG GGCACATCTT TTCGGAAAAG TAAAATTATC TGCCGGTTAT
GCCCTGTTTA ATGCAACACG CCCAACGGAA GGATATGGCA ATGCCAATAA ATCTATTCCA
TTCAGGCATG TATTTAATGC AAACGCTGTG TATTACCTTT CAACAAAAAT GACAGTGACC
CCGCATTTAT TTTATATGAA TTCAGCTTCT GCAACAGACT TCATGTTAGG TGTAAATGCA
AATAGAAAGC TTACAGAAAA CCTGGGTATA TTATTCGGTG CAGGGTACCG CGGCAGTACT
ACAAACAGCG ACGCTGCAAT CGGTGTATTA GGTTTTACAT ATAACAGAAT TGCATTTGGC
CTAAGTGGCG ACTTCAATGT TTCATCCCTT AGCAAAGATG CCAGAAATAA AACGGCGTGG
GAAATATCCA TTTCTTATAC CACACCATCC AGAGCATCCA ATAAATTAAC AATCCCCTGC
GACCGTTACT AG
 
Protein sequence
MVNISVRLFY TIQMKFISTF CVLVFIHTIS IAQDIHLTQY YTSNLSLNPA YTGNFDGDLK 
VVANSRSQWS QISPSMKTNM ISVEKKFLKR PDEFGLGLIL INDQVSSYFL HTNKIYISGS
YQKNYKGHLL RFGVQSGIVM RNINTNDQTF PSQWDYQLGA YDPTANSNEG SVKNSWNYIN
VNAGVGWAHL FGKVKLSAGY ALFNATRPTE GYGNANKSIP FRHVFNANAV YYLSTKMTVT
PHLFYMNSAS ATDFMLGVNA NRKLTENLGI LFGAGYRGST TNSDAAIGVL GFTYNRIAFG
LSGDFNVSSL SKDARNKTAW EISISYTTPS RASNKLTIPC DRY