| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2564 |
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| Symbol | lepB |
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| ID | 4186632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2943560 |
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| End bp | 2945056 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072556 |
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| Product | signal peptidase I |
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| Protein accession | YP_679159 |
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| Protein GI | 110638950 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.57183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC TTGTTCCCCC TTCTTTTTTC AGAAGAATTC AATACAATAC AATTGATTTA
TTATTTCTGA TCATTGTACT GATCATTATT ACGAATGCCT TACCGTTCTT CTCTACTGTT
CCCACAGTTG TAAACTGGTT GTTATTCGGC GTACTGGGTA TTGTGTATGA TATTGTATTC
CACAAATACA TGCACTTCAC ACCCGGCCAG GATATAATGG GTATGTTTCT TAGAAACAGC
GAAGAGCGCG GAGCGAATCC AACGGCAAAG CAATTAGCCA TTCGTTTCAT TCTTAAATAT
TACCTGTGGC CCTTTGTAAT CATATCTATT CTGATCGATA AAGAAAGACG CGGCTTACAT
GATAAGATTG CTAAAACAAT TTTATTGGAA CTGGAACAGC CTAAAGGTCA AAAAAGAGTT
TATACCAATT CGTTTCAGGA ATGGGGCGAT TCTATTTCGT TTGCCATTGT TGTAGCAACA
TTTGTACGTT GGATCTGGCT GGAGCCATAC ACCATACCTA CCGGCTCAAT GGAAAAAACA
TTGATGGTGG GTGATTTCTT ATTCGTAAAT AAATTATCCT ACGGTACACG CGCACCCATC
ACGCCGTTAC AGATTCCGCT TACACACCAG AAAGTGTGGG GAACAAATTT AAAATCATTC
AGTGATGCCA TTCGTCTTCC GTATTTCAGA TTCCCGGGTT TCACAAAAAT TAACAACAAC
GATATTGTTG TTTTCAACTA CCCGCCGGAA ACAGACCTTC CGGTTGATTT GAAAACAAAT
TACATCAAAC GTTGTATTGC CATTCCGGGC GACAGCTTAT CTGTACACAA CAAGCAATTA
TTCATTAATG GTGTTGCAGT AGAAAATCCG CCGGCAATGC AGTTTAAGTA CAAATGTTTT
ACAAATAATA TCATCTCTGA ACGTACACGT AAAAAATACA ACATCCACAC ATACGATTTG
TATTCTAATG ATGTACTGCA GTTCCAGGGT AAAAAACTAT ACCTGATTGA TCTGACACCT
GCAACCGTTG CCAAGTTACG TACAGCTAAA GTATTTGATT CAATTGTAGA TTTCAAACTG
GACGAACTGG ATCAGAATGG TTTGTTCTTC CCTTTTGCAC GCAAATCCCA AAACTGGACT
GCCGATGACT ACGGTTCGCT GTGGGTACCC AAAGCCGGTG CAACAATTAA ATTAGATTCA
AACATGGTTG AAATGTATGG ACAAACCATC ATCAATTATG AAGGAGATAA GACAATTGAA
TTAGCAGGCG ATAAATTAAA AATAGATGGT AAACTTGTAT CTGAATATAC TTTCAAACAG
GATTATTATT TTATGATGGG AGACAACAGA CATAACTCTG CCGACAGCAG ATACTGGGGC
TTTGTTCCGG GTGACCACAT TGTTGGTAAA GCCTGGATGG TCTGGTTATC GCTCGATTCA
GAACTTTCAT TCCCGGAACG CATCCGCTGG AGCCGTTCAT TTAAAATGAT TAAATAA
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| Protein sequence | MKNLVPPSFF RRIQYNTIDL LFLIIVLIII TNALPFFSTV PTVVNWLLFG VLGIVYDIVF
HKYMHFTPGQ DIMGMFLRNS EERGANPTAK QLAIRFILKY YLWPFVIISI LIDKERRGLH
DKIAKTILLE LEQPKGQKRV YTNSFQEWGD SISFAIVVAT FVRWIWLEPY TIPTGSMEKT
LMVGDFLFVN KLSYGTRAPI TPLQIPLTHQ KVWGTNLKSF SDAIRLPYFR FPGFTKINNN
DIVVFNYPPE TDLPVDLKTN YIKRCIAIPG DSLSVHNKQL FINGVAVENP PAMQFKYKCF
TNNIISERTR KKYNIHTYDL YSNDVLQFQG KKLYLIDLTP ATVAKLRTAK VFDSIVDFKL
DELDQNGLFF PFARKSQNWT ADDYGSLWVP KAGATIKLDS NMVEMYGQTI INYEGDKTIE
LAGDKLKIDG KLVSEYTFKQ DYYFMMGDNR HNSADSRYWG FVPGDHIVGK AWMVWLSLDS
ELSFPERIRW SRSFKMIK
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