Gene CHU_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2546 
Symbol 
ID4186825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2928288 
End bp2928602 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content38% 
IMG OID638072538 
Producthypothetical protein 
Protein accessionYP_679141 
Protein GI110638932 
COG category[S] Function unknown 
COG ID[COG3152] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA AACCATTTTC ATTTAACGGC CGTATCCGAA GAGCCGAATA TTTTATAAGT 
TTTGTCATGT TCCTCTATTT TTTCGGAATG AGTTATTTAA CAATGGCTTT ATTTGGTTTC
GCCGGTGTGA TTATGTTATG CGTAGGATTT ATTCCTGCTT GCTGGTTCAT CCTTGCTCAG
GGGGCTAAAC GCTGTCATGA TTTAGGCAAC AGCGGCTTCT TTCAATACAT ACCATTTTAC
CGCCTCTTTT TACTTTTTGC TGATGGTCAA AAAGGTGAAA ACGAATATGG CTTGAATCCA
AAAGGCATTC AGTAG
 
Protein sequence
MFKKPFSFNG RIRRAEYFIS FVMFLYFFGM SYLTMALFGF AGVIMLCVGF IPACWFILAQ 
GAKRCHDLGN SGFFQYIPFY RLFLLFADGQ KGENEYGLNP KGIQ