| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2528 |
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| Symbol | |
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| ID | 4187053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2907635 |
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| End bp | 2914447 |
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| Gene Length | 6813 bp |
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| Protein Length | 2270 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638072521 |
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| Product | hypothetical protein |
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| Protein accession | YP_679124 |
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| Protein GI | 110638915 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATGA AAATCGGAAT TCTAACATTT CTGTTTGCTG TTTGCGCTAG TATACAGGGA
TATGCCCAAT GTAATAATTG TACAACTTCT TATGCTTCAA ATGCTGCAAT TGTTGCAACA
GCTAATAATC AGGTAATTTG TATTTCCGGA GGAAGTTCAT TTACATTTAT TTCTACGTAT
AGAAATGTAC GGTTGAAAAT CTGCGCTCCG AATGTTCAAC TGACCAATGT TCAGGTCGGA
ACAACCGCCC TGAGCAATAC AATTGAAAGT TTTGGAGACA ATACCCATAT AACTTCCCTG
GTAGCAGAAG CGGATACCTT TTCATTTATT GCTCATAATA CAGGCGCACT TTTGTCTAGT
GCAACCATTA ACGGCAAGTC GTCTTTCCTT ACTACAACAG GAGCCATACT TACGATTTCT
CAGAATTTAA ATCCGGGCGG GCAGATATTT TTTACTGCGG AAGAAAATTC AACCATAAAC
ACACAGGAAA TTACATCCAA TCAAGGCGGT AGAATTATTG TCGGGAAAAA CGCTCACTTT
AACTCAACCG GAAAAGTGAT CCTTCAAAAT GAAGGGTTCG TTTTGAATAA TGGAGAACTT
ACTGCTTCAG GAGATTTTAC TGTACAGAAC GGTGGAAACG CGCTGACAAA TTTTTGTGGC
GAATCGAAGA TAACCATTGG CGGAAAGCTG ATCATCAATA GTGGTAGAAT ATATAATGCA
GGAACTGTTA TTGCAGGAAC CATTGCAATC AATGCAAATG CAGGACCGAT TTACATGAAT
GAAGGTGCTG TGATGCAAGC CACAAATCTG GAAACAAATA ATACCCCGAA TTTATTCAGA
GGAGATAGTA TTCCTGCCGG GGAGTGTGCG TTATTTAAAA TAACTTCTTA CGGTTCATTT
AACTCTGCCT TGTCGAATTC TTCTAAAATT AAATATTGCG GACCTTCAGC AACTGCTACA
CAATTAGGAC AGGCAACACC GGATTGTAAC TGTATTTCGG ATAAAGCATT ATGTACGCCT
CTTTGCCTGC CACCTACAGC AGTAACGATC ACTGCTCCCG TGAACAATGT ATGTGCGGGA
AGTTCAACGG TATTAACAGC GAATGCAAGT GGATTGAAAG CAGGGGATAC CTATACATAC
AGCTGGTATA AAAACAGTGT TGTTCCCGCA AACCTGATCG TGACTAATAC AAACACGAAT
ACACTTACTG TTTCAGAGAG CGCCACCTAT TTTGTTGTTG TTGCAAATAC CATTAAGCCT
GCTGCCTGTT CTACCCAAAA TACGAGCGGC TTTACATTTA CAGTAAATCC GATTCCGCCG
CAGCCTACCG TAACGCCAAG CGGTCCGTTA ACCTTCTGTA ACGGTGGCTC TGTAACGCTT
ACCGCATCAA CCGCAGGTTA TACGGGCGGT ACATACACGT GGTCAACCGG CGCCACCGGC
AGTTCGCTGG TTGTAACTAC ATCAGGAACA TATTCCGTAA TCTATAAATC GGCCGCAGAC
TGTACGGCGC CAACTTCGGC ATCCACAACA GTAACGGTAA ATCCGATTCC GCCGCAGCCT
ACCGTAACAG CAAATGGTCC GACAACCTTC TGTAACGGTG GCTCGGTAAC GCTTACCGCA
TCAACCGCAG GGTATACAGG TGGTACGTAT ACCTGGTCAA CCGGCGCAAC CGGCAGTTCG
CTGGTTGTAA CTACTTCAGG AACATATTCC GTAATCTATA AATCGGCCGC AGATTGTCCT
GCACCAACTT CAGCATCCAC AACAGTAACG GTAAATCCGA TTCCGCCGCA GCCTACCGTA
ACAGCAAGCG GTCCGTTAAT CTTCTGTAAC GGTGGCTCGG TAACGCTTAC CGCATCAACC
GCAGGATATA CCGGCGGTAC GTATACCTGG TCAAACGGAG CAACCGGCAG TTCGCTGGTT
GTAAGTACTT CAGGAACATA TTCCGTAATC TATAAATCGG CCGCAGACTG TACGGCACCA
ACTTCAGAAT CCACAACAGT AACGGTAAAT CCGATTCCGC CGCAGCCTAC CGTAACAGCA
AGCGGTCCGT TAATCTTCTG TAACGGTGGC TCGGTAACGC TTACCGCATC AACCGCAGGA
TATACCGGCG GTACGTATAC GTGGTCAAAC GGAGCAACCG GCAGTTCGCT GGTTGTAAGT
ACTTCAGGAA CATATTCCGT AATCTATAAA TCGGCCGCAG ACTGTACGGC GCCAACTTCG
GCATCCACAA CAGTAACGGT AAATCCGATT CCGCCGCAGC CTACCGTAAC AGCAAGCGGT
CCCTTAATCT TCTGTAATGG TGGCTCGGTA ACCCTTACCG CATCAACCGC AGGTTATACC
GGCGGTACAT ATACGTGGTC AACCGGCGCA ACCGGCAGTT CATTGGTTGT AACTACATCA
GGAACGTATT CCGTAATCTA TAAATCGGGA GCGGACTGTA CGGCACCAAC TTCAGCTTCA
ACAACAGTAA CGGTAAATCC GATTCCGCCG CAGCCTACCG TAACAGCAAG CGGTCCCTTA
ATCTTCTGTA ATGGCGGTTC GGTAACCCTT ACCGCATCAA CCGCAGGTTA TACCGGCGGT
ACATACACAT GGTCAAACGG AGCAACCGGC AGTTCGCTGG TTGTAAGTAC TTCAGGAACA
TATTCCGTAA TCTATAAATC AGCCGCAGAT TGTCCTGCGC CAACTTCGGC ATCCACAACG
GTAACGGTGA ATCCGATTCC GCCGCAGCCT ACCGTAACAA CAAGCGGTCC GACAACCTTC
TGTAATGGCG GTTCGGTAAC GTTTACCGCA TCAACCGCAG GATATACAGG TGGTACGTAT
ACCTGGTCAA ACGGAGCAAC CGGCAGTTCG CTGGTTGTAA GTACTTCAGG AACATATTCC
GTAATCTATA AATCGGCCGC AGACTGTCCT GCGCCAACTT CGGCATCCAC AACGGTAACG
GTGAATCCGA TTCCGCCGCA ACCCACAGTA ACAGCAAGCG ATCCGACAAC CTTCTGTAAC
GGTGGTTCTG TAACCCTTAC TGCATCTACA GCAGGATATA CAGGTGGTAC GTATACCTGG
TCAAATGGAG CAACAGGTAA TTCATTAGTT GTAAGTACTT CAGGAACGTA TTCCGTAATC
TATAAATCGG CCGCAGACTG TACGGCGCCA ACTTCGGCAT CCACAACAGT AACGGTAAAT
CCGATTCCGC CGCAGCCTAC CGTAACAGCA AATGGTCCGA CAACCTTCTG TAACGGTGGT
TCTGTAACCC TTACTGCATC TACGGCAGGA TATACAGGTG GTACGTATAC CTGGTCAAAT
GGAGCAACCG GTAATGCATT GGTTGTAACT ACATCAGGAA CGTATACGGT TGATTATAAA
TCCGGCGCAG ATTGTACGGC GCCAACTTCA GCTTCAACAA CAGTAACGGT AAATCCGATT
CCGCCGCAGC CTACCGTAAC AGCAAGCGTT CCGACAACCT TCTGTAACGG CGGCTCGGTA
ACCCTTACTG CATCAACCGC AGGTTATACC GGCGGTACAT ACACATGGTC AAACGGAGCA
ACCGGTAATT CATTGGTTGT AACTACATCA GGAACGTATA CGGTTGATTA TAAATCCGGC
GCAGATTGTA CGGCGCCAAC TTCGGCATCC ACAACAGTAA CGGTAAATCC GATTCCGCCG
CAACCCACAG TAACAGCAAG CGATCCGACA ACCTTCTGTA ACGGTGGTTC TGTAACCCTT
ACTGCATCTA CAGCAGGATA TACAGGTGGT ACGTATACCT GGTCAAATGG AGCAACAGGT
AATTCATTAG TTGTAAGTAC TTCAGGAACG TATTCCGTAA TCTATAAATC GGCCGCAGAC
TGTACGGCGC CAACTTCGGC ATCCACAACG GTAACGGTGA ATCCGATTCC GCCGCAGCCT
ACCGTAACAG CAAATGGTCC GACAACCTTC TGTAACGGCG GCTCGGTAAC CCTTACTGCA
TCTATGGCAG GATATACAGG TGGTACGTAT ACCTGGTCAA ATGGAGCAAC AGGCAGTTCG
CTGGTTGTAA GTACTTCAGG AACGTATACG GTTGATTATA AATCCGGCGC AGATTGTCCT
GCACCAACTT CAGCTTCAAC AACAGTAACG GTGAATCCGA TTCCGCCGCA GCCCACAGTA
ACAGCAAGCG TTCCGACAAC CTTCTGTAAC GGCGGCTCGG TAACCCTTAC TGCATCTACA
GCAGGATATA CAGGTGGTAC GTATACCTGG TCAAATGGAG CAACAGGTAA TGCATTGATT
GTAACTACAT CGGGCATCTA CAAAGTGGAT TATAAATCAG ACGTAGATTG TCCTGCACCA
ACTTCAGCTT CAACAACGGT AACGGTGAAT CCAATTCCGC CAAAACCTGA AATCGCAACT
ACTACACCCG CAACGTTTTG TTCAGGAGAT TCAATTATAC TTCGTGCAAG CAGTTTGGGT
TTTAGCGGAG GAACATTTAA CTGGTCTAAT GGTTCAGCGG TTAATCCATT AAAAGTAACT
GCATCCGGTA AATATTCCGT TACGTATACG TCATCAAATG ATTGCCCCTC TGCAGCTTCG
GATAGTATTG AAGTAACGGT TAATCCAATC CCTCCAAAGC CCGAAATAGC AACTACTACA
CCGGCAACGT TTTGTTCGGG AGATTCAATT ATACTTCGTG CAAGCAGTTT GGGTTTTAGC
GGAGGAACAT TTAACTGGTC TAATGGTTCA GCGGTTAATC CATTAAAAGT AACTGCATCC
GGTAAATATT CCGTTACGTA TACGTCATCA AACGATTGCC CCTCTGCAGC TTCGGATAGC
ATTGAAGTAA CGGTTAATCC AATTCCGCCA AAACCTGAAA TCGCAACTAC TACACCCGCA
ACGTTTTGTT CAGGAGATTC AATTATACTT CGTGCAAGCA GTTTGGGTTT TAGCGGAGGA
ACATTTAACT GGTCTAATGG TTCAGCGGTT AATCCATTAA AAGTAACTGC ATCCGGTAAA
TATTCCGTTA CGTATACGTC ATCAAATGAT TGCCCCTCTG CAGCTTCGGA TAGCATTGAA
GTAACGGTTA ATCCAATCCC TCCAAAGCCC GAAATAGCAA CTACTACACC GGCAACGTTT
TGTTCGGGAG ATTCAATTAT ACTTCGTGCA AGCAGTTTAG GTTTTAGCGG AGGAACATTT
AACTGGTCTA ATGGTTCGGC GGTTAATCCA TTAAAAGTAA CTGCATCCGG TAAATATTCC
GTTACGTATA CGTCATCAAA CGATTGCCCA TCTGCCGCTT CGGATAGTAT TGAAGTAACG
GTGAATCCAA TTCCGCCAAA ACCTGAAATC GCAACTACTA CACCGGCAAC GTTCTGTTCA
GGAGATTCAA TTATACTTCG TGCAAGCAGT TTGGGTTTTA GCGGAGGAAC ATTTAACTGG
TCTAATGGTT CGGCGGTTAA TCCATTAAAA GTAACTGCAT CCGGTAAATA TTCCGTTACG
TATACGTCAT CAAACGATTG CCCATCTGCA GCTTCGGATA GCATTGAAGT AACGGTGAAT
CCGATTCCGC CGGCGCCAAG AATAGATACT GACGGCCCAA CTGTTTTCTG CATGGGTGGT
TCTGTCGTTC TTTCAGCATC GAGCGCTGGT TTTACTGGAG GAACATTTAA CTGGTCTAAT
GGTTCAGCCG ATAACCCATT AAAAGTAACT GCATCCGGTA AATATGCGGT TACGTATACT
TCATCAAATG ATTGCCCTTC TGCAGCTTCA GATACTATTG AAGTTACCGT TAACCCAATA
CCTCCGCAGC CTGCTGTACA AGCAGACGGC CCATTAACAT TCTGTCCGGG AGAAACAGTT
ACCATGTCTG CCGTGACAAC AAATTTTACA GGTACATTTG AATGGTTTAA AGAAGATGTT
TCATTGGGTA CCGATGCTGC TGTTACATTA AGTGAAGCAG GTAATTATCG GGTATACTTT
AAAACGGATG CAGGCTGTGC GGCAAACCTT TCAAAAGAAT TTTCGATACG TTATTCCCCT
GATAATTCTC CTGTCGATTT AGGAAAAGAT ATCGTAACCT GTCAGAACTA TATTGATCTG
CATGCTGTAA CGCCTGCAGT AGGTAAAGGC AAGTGGTCGG TATATGAAGC AATTGCTACA
ACGTTTGCCA GTAAAACAGA TTCAAACAAT GTTCGTGTAC TTGGCTTGCA GGCAGGTTCA
ACCTATTCGT TTATCTTTAC TGTTTCTGAA GGATGCGGAC GTGAAAAATC AGATACGATT
AGTATTCGGG CTGGTCTGCC TGATTTTGAT ATTACATCGT TGCAGATTCC GATGGATACC
TTATGTGTTG GTGTATCCAG AAGGGTAGAA GCTTTTGCTA CCGGCGGCTC TGACCATTAT
AGCTATGCAT GGATCAACGC AGCAACGAAG GATACCATCA CAACCTACCG GAATTACCTC
GATATTGTTC CGGATGGCAT GGATAATATT TATTATGTAT ATGTGAACGA TTTAGACCAG
GCTGGTTGCA GAACGTTTCA GGATACCCTT ACCATTCACG CGATTGATAA ACAAATGCTT
CTTATTCCAA ATCTGATTAC ACCAAATGAG GATGGTAAGA ACGATGAATT GAAAATTGTT
GAGGTGAATA ATTATGATAA AAAAATGTTC TCTGCAAACT CTTACATTGA GATCTATAAT
CGTTGGGGAA ACCGTGTGTA TGAAGCCAAT AATTACGACG GAACATGGAA GGCGGATAAC
ACAGAAGACG GAGTTTATTA TTATTATTTA AAACCAGGCT GCGGTCACGA GGAATACAAA
GGCTGGCTTC AGATTTTAGC TAAATCTAAT TAA
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| Protein sequence | MNMKIGILTF LFAVCASIQG YAQCNNCTTS YASNAAIVAT ANNQVICISG GSSFTFISTY
RNVRLKICAP NVQLTNVQVG TTALSNTIES FGDNTHITSL VAEADTFSFI AHNTGALLSS
ATINGKSSFL TTTGAILTIS QNLNPGGQIF FTAEENSTIN TQEITSNQGG RIIVGKNAHF
NSTGKVILQN EGFVLNNGEL TASGDFTVQN GGNALTNFCG ESKITIGGKL IINSGRIYNA
GTVIAGTIAI NANAGPIYMN EGAVMQATNL ETNNTPNLFR GDSIPAGECA LFKITSYGSF
NSALSNSSKI KYCGPSATAT QLGQATPDCN CISDKALCTP LCLPPTAVTI TAPVNNVCAG
SSTVLTANAS GLKAGDTYTY SWYKNSVVPA NLIVTNTNTN TLTVSESATY FVVVANTIKP
AACSTQNTSG FTFTVNPIPP QPTVTPSGPL TFCNGGSVTL TASTAGYTGG TYTWSTGATG
SSLVVTTSGT YSVIYKSAAD CTAPTSASTT VTVNPIPPQP TVTANGPTTF CNGGSVTLTA
STAGYTGGTY TWSTGATGSS LVVTTSGTYS VIYKSAADCP APTSASTTVT VNPIPPQPTV
TASGPLIFCN GGSVTLTAST AGYTGGTYTW SNGATGSSLV VSTSGTYSVI YKSAADCTAP
TSESTTVTVN PIPPQPTVTA SGPLIFCNGG SVTLTASTAG YTGGTYTWSN GATGSSLVVS
TSGTYSVIYK SAADCTAPTS ASTTVTVNPI PPQPTVTASG PLIFCNGGSV TLTASTAGYT
GGTYTWSTGA TGSSLVVTTS GTYSVIYKSG ADCTAPTSAS TTVTVNPIPP QPTVTASGPL
IFCNGGSVTL TASTAGYTGG TYTWSNGATG SSLVVSTSGT YSVIYKSAAD CPAPTSASTT
VTVNPIPPQP TVTTSGPTTF CNGGSVTFTA STAGYTGGTY TWSNGATGSS LVVSTSGTYS
VIYKSAADCP APTSASTTVT VNPIPPQPTV TASDPTTFCN GGSVTLTAST AGYTGGTYTW
SNGATGNSLV VSTSGTYSVI YKSAADCTAP TSASTTVTVN PIPPQPTVTA NGPTTFCNGG
SVTLTASTAG YTGGTYTWSN GATGNALVVT TSGTYTVDYK SGADCTAPTS ASTTVTVNPI
PPQPTVTASV PTTFCNGGSV TLTASTAGYT GGTYTWSNGA TGNSLVVTTS GTYTVDYKSG
ADCTAPTSAS TTVTVNPIPP QPTVTASDPT TFCNGGSVTL TASTAGYTGG TYTWSNGATG
NSLVVSTSGT YSVIYKSAAD CTAPTSASTT VTVNPIPPQP TVTANGPTTF CNGGSVTLTA
SMAGYTGGTY TWSNGATGSS LVVSTSGTYT VDYKSGADCP APTSASTTVT VNPIPPQPTV
TASVPTTFCN GGSVTLTAST AGYTGGTYTW SNGATGNALI VTTSGIYKVD YKSDVDCPAP
TSASTTVTVN PIPPKPEIAT TTPATFCSGD SIILRASSLG FSGGTFNWSN GSAVNPLKVT
ASGKYSVTYT SSNDCPSAAS DSIEVTVNPI PPKPEIATTT PATFCSGDSI ILRASSLGFS
GGTFNWSNGS AVNPLKVTAS GKYSVTYTSS NDCPSAASDS IEVTVNPIPP KPEIATTTPA
TFCSGDSIIL RASSLGFSGG TFNWSNGSAV NPLKVTASGK YSVTYTSSND CPSAASDSIE
VTVNPIPPKP EIATTTPATF CSGDSIILRA SSLGFSGGTF NWSNGSAVNP LKVTASGKYS
VTYTSSNDCP SAASDSIEVT VNPIPPKPEI ATTTPATFCS GDSIILRASS LGFSGGTFNW
SNGSAVNPLK VTASGKYSVT YTSSNDCPSA ASDSIEVTVN PIPPAPRIDT DGPTVFCMGG
SVVLSASSAG FTGGTFNWSN GSADNPLKVT ASGKYAVTYT SSNDCPSAAS DTIEVTVNPI
PPQPAVQADG PLTFCPGETV TMSAVTTNFT GTFEWFKEDV SLGTDAAVTL SEAGNYRVYF
KTDAGCAANL SKEFSIRYSP DNSPVDLGKD IVTCQNYIDL HAVTPAVGKG KWSVYEAIAT
TFASKTDSNN VRVLGLQAGS TYSFIFTVSE GCGREKSDTI SIRAGLPDFD ITSLQIPMDT
LCVGVSRRVE AFATGGSDHY SYAWINAATK DTITTYRNYL DIVPDGMDNI YYVYVNDLDQ
AGCRTFQDTL TIHAIDKQML LIPNLITPNE DGKNDELKIV EVNNYDKKMF SANSYIEIYN
RWGNRVYEAN NYDGTWKADN TEDGVYYYYL KPGCGHEEYK GWLQILAKSN
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