| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2513 |
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| Symbol | acrD |
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| ID | 4185653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2886590 |
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| End bp | 2889994 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072506 |
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| Product | cation/multidrug efflux pump |
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| Protein accession | YP_679109 |
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| Protein GI | 110638900 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.422561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACACAA ATAATAATCT TACACATATG AAAGAGTTTA AAGTCAGTAG CTGGTCCATT
GATAATAAGA CAAGTATTTA TGTACTCACC ATCATCCTTT CGATTTTTGG TTTGATGTCT
TATTTCAATA TGCCCAAAGA GCAATTCCCT GAGATCGTAT TTCCTCAGAT GTATGTTGCT
ACCATATATC CCGGTACTTC GCCAAGTGAT ATGGAGAAGT TGGTTACCAA GCACATTGAA
AAACAGGTAA AGGGTATTTC CGGTGTTAAA AAAATCACCA GTAATTCCAT CCAGGATTAT
TCAAGTGTAT TGGTAGAATT CAATACAGAT GTGGATGTAA ATATTGCGAA ACAGAAAGTT
AAAGATGCGG TAGATCAGGC GAAGAATGAT TTACCGACAG ACTTACCGGA TGATCCGCAG
GTAATTGAAG TAGACGTTTC TCAGGTTCCG ATCATGGGTA TCAACCTTTC GGGTGATTAT
GAATTAAGCA AACTTAAAAA GTATGCGGAT GATATGCAGG ATCAGATCGA ATCGATGAGA
GAGATCCGTC GTGTAGACAT CATCGGAGCA CCGGAGCGTG AGATTCAGAT CAACGTGGAT
AAATACAAAA TGGAAGCGGC GAATATTACA TTTTCGGATA TTGAGCGCGC TGTACAAAGC
CAGAACTTAA CGATCTCCGG CGGTACCATT AAAATGGATG GTATCAAACG AAACATTACT
GTTACAGGTG AATTTGATGA GATGGATCAG ATCAATAACC TCTTGATCTT ATCACAGTCA
GGCGCTAAAA CATATCTGAA AGACATTCTT GAGAATGGTG GTGTAAAAGA CACGTACAAA
GAAGCAGAAA GCTTTGCCCG TTTGAATGGT AAGAACGTAA TTACCCTGAA CGTAATTAAA
CGCGGCGGGA TGAACCTGAT CGATGCTTCT GATAAAATTC AGGAATTGAT TGCAAACCAG
CAAAAGACAA AATTACCGGA TGGTTTAAAA ATAACGATCA CCGGTGACCA GTCGGATGCA
ACACGTACAA CCCTGCATGA TCTGATCAAT ACGATCATCA TTGGGTTTAT CCTTGTAGTT
ATCATCTTAA TGTTCTTCAT GGGTACAACC AACGCCATCT TTGTTGGTTT GTCTGTACCA
TTATCCATGG CGATCGCATT CATTGTTCTG CCTACGATGG GCATCACGCT GAATATGATC
GTACTCTTTG CCTTCCTGCT CGCACTCGGT ATTGTGGTGG ATGATGCGAT TGTGGTTATA
GAGAATACGC ACCGTATCTA TGAAAACGGA AAAGTTCCGA TCAAGCAGGC TGCGAAACAA
GCGGCAGGCG AGGTATTCAT GCCGGTATTC TCCGGTACGA TGACTACATT GGCTCCATTC
GTTCCGTTGT TATTCTGGAA AGGGATCATT GGTAAGTTCA TGTACTTCCT GCCTGTTACA
TTGATTGTAA CCTTGCTTGC ATCGTTATTG GTTGCATATA TTATCAACCC GGTATTTGCG
GTTGATTTCA TGAAGCCGCA CGCGCATGAT GAAAGCCATA AAAAAATTAC ACGTGGTTAT
ATCATTACGA TGATTGTATT TGCTGTTATC GCTTTATTAG GTTATGCAGC AGGTTCATTC
GGTTTTGGTA ATTTTGTGGT TGTTCTTGCG CTTCTGTATT CATTAAATAA ATTTGTACTC
ATAGATGTGA TCCAGCATTT CCAGGACGAT ATCTGGCCGG GTGTACAAAA TAAATATGAA
AAAGTGCTTG AGTGGTGTCT GGTTGGTGCA AGACCTTTCC TATTGTTAGG TGGTATTGTT
TTCATGTTTA TCTTTTCAAT TATCTTAACA GGTATTGTTA AACCTAAAGT GGTTTTCTTC
CCGTCAAGTG ATCCGAATTT TATTTACGCA TACATCAATT TACCGATTGG TACGGATCAG
TCTTATACAG ATTCGATCTC TCAGGTAGTT GAAAACCGCA TTTTTAAAGT CATTGGCCAC
GAGAACCCTA TTGTATCTTC AGTCATTACG AACGTTGCGA TCGGCGCGGG TGATGCAAAT
GAGATGGATT TAAGTACGGC TCCGCACAAA GCAAAAGTAA CGGTTGCTTT TGTTGAGTTT
GCACACCGTA AAGGTGAATC AACAGTACCT TATTTGGGCA AGATCCGTGA GGCTGTGAAA
GGTATTCCCG GAACACAGAT CATCGTTGAT CAGGAACAAG GCGGTCCGCC AACGGGTAAG
GAGATCAACA TTGAAATTAT TGGTGATGAT TACGATGAAT TGATTGAAGT TTCTGAAAAG
TTAAAAAGAA CGATTGATAA TTCAGGTATC CAGGGAATTG AAGATCTGAA ATCGGATGTT
GTTAAAAACA AACCGGAAAT TGTAATTGAC ATTGATAAAG AGAAAGCTAA TGCAGAAGGT
GTTTCTGTAG CCCAGATCGG TATGGAATTA CGCTATGCAG TGTTTGGAAA AGATGTTTCT
AAATTCCGTG ATAAGGATGA TGAATATGAT ATTGAATTGA GATACACATT CGGTCAGCGG
ACAAACATCG ATGATCTGAT GAATTCAAAA ATTACGTTCC GTGATATGAA CATGGGTGGC
GCGATCCGCC AGATTCCTTT ATCATCTATT GCGAAAGCGC GTTTTGACAA TTCATATGGC
GGTATCAAAC GTAAAAATCA GCGTCGTATC GTAACGTTAT CATCTAACGT ATTATCCGGT
GCCAATTCAA ATGAAATCAA TGCAGAGATC AAAAAACTGA TCCCTGGCTT CAAGAAGCCG
ACAGAGGTAT TGATTCAGTT AACAGGTGCA CAGGAAGAAC AGGCTGAAAC AGGGGCATTC
CTTGGAATGG CTATGCTGAC TTCATTCATC ATGATCTTAT TCATTCTTGT AACACAATTC
AACTCGATCA GTAAACCGTT GCTGATTATT TCTGAAATCG GATTCAGTGT TATTGGGGTA
TTGCTGGGGG TAGCTATTTT CGGAATGTCT ATTTCGGTTG TAATGACTGG TGTTGGTATC
ATTGCACTCG CAGGTATTGT AGTTCGTAAC GGTATTATCC TGGTTGAGTT CACCGATATT
ATCATGGAAG AAGGCCACGA CCTGAAATAC GCGATCGTTC ACGCAGGTAA AGTGCGTATG
ACGCCGGTAT TGCTTACGGC TACGGCAACC ATTCTTGGTT TGATTCCATT AGCTGTAGGT
CTGAATATCG ACTTCGTACG GTTATTCGCA GAAGGTAATC CGCATATTTT CTTTGGTGGC
GACAGCGTTG CATTCTGGGG CCCTCTGGCA TGGACAATGA TTCACGGGTT AGCTTTTGCT
ACGTTCTTAA CATTGATCTT AGTACCGATC ATGTACTATA TCAACTACAA AGCCAGCAGA
AAAATTAAAG GCTGGTTTGG CGTTAAGGTG GAGAAACTGT CGTAA
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| Protein sequence | MHTNNNLTHM KEFKVSSWSI DNKTSIYVLT IILSIFGLMS YFNMPKEQFP EIVFPQMYVA
TIYPGTSPSD MEKLVTKHIE KQVKGISGVK KITSNSIQDY SSVLVEFNTD VDVNIAKQKV
KDAVDQAKND LPTDLPDDPQ VIEVDVSQVP IMGINLSGDY ELSKLKKYAD DMQDQIESMR
EIRRVDIIGA PEREIQINVD KYKMEAANIT FSDIERAVQS QNLTISGGTI KMDGIKRNIT
VTGEFDEMDQ INNLLILSQS GAKTYLKDIL ENGGVKDTYK EAESFARLNG KNVITLNVIK
RGGMNLIDAS DKIQELIANQ QKTKLPDGLK ITITGDQSDA TRTTLHDLIN TIIIGFILVV
IILMFFMGTT NAIFVGLSVP LSMAIAFIVL PTMGITLNMI VLFAFLLALG IVVDDAIVVI
ENTHRIYENG KVPIKQAAKQ AAGEVFMPVF SGTMTTLAPF VPLLFWKGII GKFMYFLPVT
LIVTLLASLL VAYIINPVFA VDFMKPHAHD ESHKKITRGY IITMIVFAVI ALLGYAAGSF
GFGNFVVVLA LLYSLNKFVL IDVIQHFQDD IWPGVQNKYE KVLEWCLVGA RPFLLLGGIV
FMFIFSIILT GIVKPKVVFF PSSDPNFIYA YINLPIGTDQ SYTDSISQVV ENRIFKVIGH
ENPIVSSVIT NVAIGAGDAN EMDLSTAPHK AKVTVAFVEF AHRKGESTVP YLGKIREAVK
GIPGTQIIVD QEQGGPPTGK EINIEIIGDD YDELIEVSEK LKRTIDNSGI QGIEDLKSDV
VKNKPEIVID IDKEKANAEG VSVAQIGMEL RYAVFGKDVS KFRDKDDEYD IELRYTFGQR
TNIDDLMNSK ITFRDMNMGG AIRQIPLSSI AKARFDNSYG GIKRKNQRRI VTLSSNVLSG
ANSNEINAEI KKLIPGFKKP TEVLIQLTGA QEEQAETGAF LGMAMLTSFI MILFILVTQF
NSISKPLLII SEIGFSVIGV LLGVAIFGMS ISVVMTGVGI IALAGIVVRN GIILVEFTDI
IMEEGHDLKY AIVHAGKVRM TPVLLTATAT ILGLIPLAVG LNIDFVRLFA EGNPHIFFGG
DSVAFWGPLA WTMIHGLAFA TFLTLILVPI MYYINYKASR KIKGWFGVKV EKLS
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