| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2494 |
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| Symbol | |
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| ID | 4184638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2865480 |
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| End bp | 2871566 |
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| Gene Length | 6087 bp |
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| Protein Length | 2028 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638072487 |
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| Product | hypothetical protein |
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| Protein accession | YP_679090 |
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| Protein GI | 110638881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.415505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0870221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTT TAACTTTAAC CATTTTATCA TTCTTTACAC TTACTCTTGC AATGGCACAA
ACAGATGGTA TGAAACAACG TTGGGACAAA ATTGACGCTT ATTTAAATGA ATCCTTACCT
AAGTCTGCGT TAACAGACCT CACGAAACTT TACAGCGAAG CAAAAGAAAA AAAAGATGCA
GATACGCAGA TCAAAGCATT GATGTATATC ATGCGCTGCA CGGATATGTC TGAAGAAGAT
GCTTTTGAAA AAGACATTGC TTTTATACGC AAAGAAATTA AGACTTCTGC CTTCCCGGTT
AACGCTGTTC TTGAATCCAT GCTGGGAGAA ATGTACTGGC AATATTTTCA GCGCAGCAGA
TACCGTTCTG ATATCAGTGC TTCTACCAAT GCAGATGATA CGGATATTCA GACATGGGAT
CTGAAAACAA TTCTGGAAGC GGCTATCAAC TCCTATCATG CATCGCTCAA AGATAAAGAG
CTGTTGCTGA ACTATCCGAC AGAAACATTA AAAGAAGTTA TCTATAAAAG CAGTAATCAT
GTTTATACAG CCAATCTGTA CGACTTTCTG GGTAAAAGAG CACTGACATT TTTCCAGTCG
TCAGAATCAA GTGTAAGCCG CCCTGCGGAA CAATTCAATC TGAATGATGC ACGGTATTTT
TCACTGCCTG CTGTATTCAC CACATTAACC ATACAAAGCG AAGACACGCT GAGCCTGCAT
TTATATGCCA TGCGATTGAT GCAGGACCTG GAAAAGATCC ATCTGAATGA TAGCAACCCA
ACTGTACTTG TTGATCTGGC TATAAGCCGT TTAAAGTTTA CGTCAGCACA TTCAGGCCTT
CCAAATGCTA TTGAGCTTAA ACTTGCTGCA CTTGAAAATC TGGAAGCATC TTCCTTACCC
TATCCGATCT CAACGGAGGT AAGTTATGAG ATCGCGGTGA TCTGGCATGA ACGTGCTGCG
GATATGAGCG GCTTGAAAAA CAGTCCGAAG TATCCGGATG CAAATATTAA AAGCATACAG
ACGTGTGATG CAGCCATTAA ACGTTTTCCG GGCTCTGAGG GTGCCAACCA CTGTGAATCT
GTAAAAGAAA CAATCCTTAA ACCATCGCTT GAATTAAAAC TGGAAGAAGT TAATATTCCG
CAGGCACCTT TCCGCACGCT GGTTGCTTAT AACAATATCA AAACCCTTTC ACTTCGTGTG
ATCCGGTTAA CCGCGGAAGA ATCGGAAAAA TTAAGAAATG ATCTCGACTA CCGGTACGAT
GAACGTTTCG AATCATTCAA GCCTTATCTT GACCGCACAC CTGTAAAAAA ATGGTCGGTT
GGTCTGCCGC AGGATCCGCA GCTGCGCGGG CATCACACAG AAGTTGTTAT TGACCCGCTT
GCAGAAGGTT TTTATCTGAT CATTGCTTCA GATGTTGAAA AGATTGAAAA ACAGAAAGCG
CTTTTTGCAT ATACGTTTAC AACCGTTTCA AACATTTCAT ATGTAGCACG TACTACGGAA
GGCAAGGTGC AGCTGTATGT ATTGAACAGG CATACAGGCA AACCCATTAA AGATGCACAG
GTAAGCGCTT ATACAAACGA ATATAATTAT GAAACACACC GGAACCGGAA AAAAGTAATA
GGTATCTTTC CTACCGATGA AACTGGTTAC ACAGAAGTAA AGGCTGCAAA AGATAGCTAT
TCGTCTTATG TAAATTTTGA TATTAAAACA AAAACAGATC GCTTGATCAG TGATAACAGA
AATTCCTCGG GGTATTATAT CTACAATGAA AAACATCCGA CCGGTAATTC TTTTTATCAT
ACGTCTATGC TGGTGTTTAC AGATCGTGCC ATCTACAGAC CCGGACAAAC AATCTATTTC
AAAGGCATTG TATTTAATAC GGATGTAAAA AATACATATA ACGTTAGTAA AAATACTCCC
GTACGCATTT ATTTCTATGA TACGAATAAT AAAGAAACGG CATTTGCAGA TCTTGTCACG
AATGAATTTG GATCTGTGCA GGGAACTTTT ACCGCACCAG TCGGATCGCT TACCGGAAGC
ATGCATATTG GCAATGACAT GGGGAATGCC TATTTCAATG TAGAAGAATA TAAGCGCCCG
AAGTTTGAAG TAAAGATACA GCCGCTTACG GGGCAATATA AACTGAATCA GGAAGTAGAA
GTTAACGCTT TGGCAAAAGC CTATGCCGGG AATGCTATAG ATGGTGCAGA AGTTAATTAT
CGTGTAGTAC GTCAGGTACA GATCCCTTAT TGGTACGCGC GTTACTGGGG TTACCGCAAC
CCGCAGGAAA CGGTTATTAT GACCGGAAAA TCTGTTACAG ATGCAGCTGG TGCATTCTCC
ATTAAATTCG CTGCCCTGCC TGATGCCTCC GTTTCTCCGG AAAGCAAATC AACATTCCTG
TATACCGTAT ATGCGGATGT GATTGACATC AATGGTGAAA CACACAGCGA CCAGCTCTCT
GTTTCAATCG GTTATTCTTC TCTGGTATTA AACATTCAGG CTCTTGCCGT TGTTGAAAAA
GGAAAGCCAT CCGCATGCAC TTTTTCTGCT GCCAATCAAT CCGGAGAACC TGAAGCCGCA
ACCATACAGG TAAAAGTTTT CAAGCTGGCA GCGCCTGCTA AAGCATTACG TGAACGTTTA
TGGGAAGCAC CGGACAAGCC CCTGTTAAGC GAGGAGGCGT TCCGGAAATT ATTCCCGGAA
GATGTATATG CAAATGAAAC GGATCAGGAA AATTTTCCTC AGAAATTAAT CTTCGAAACA
ACCCTGCAGG CAACCAAAGA AAAAGGCGCG GTATGGAATG TACCTGAAAA CTGGGAAACC
GGACAGTATC TTGTAAAAGC AACAGCACTG GATAAAGATA AAACCGAAAG TGAAACACAA
ACGACATTCA CTAAAACAGA TCCGTCAGGC AGCAAACTTC CATATGCCAT GCAAAAATGG
ACAAACGTTT TACCTGCCAG TACACAACCG CTGCAGAAAG CCATGTTTGA GATCGGCTCA
TCTTTCTCTG ACGTACATGT GATCTGCGAA GTGGAACGTG ACGGAGTAAT TATCCGCAAA
GAATTTATTA CACTGAAAAA TGATATTAAA AAATTTGAAC AGCTTATTAC TGAAGCAGAC
CGTGGCGGCT TAGCTGTGCA TTATGTATTC GTGCATAATA ACCGTTTGTA CGGCGGCACA
GAAAACATAT CCATACCGTT TAGCAATAAA GACGTAACGA TAAAATGGGA AACCTTCCGA
AGCAAGCTGC AGCCGGGGCA GGCAGAGCAG TGGCGTGTAA TCATCAATAA AAAGGATGGA
GAAAAACAGG CTGCAGAATT TTTAGCTACG ATGTATGATG CTTCGCTGGA TGCCTTTGCA
TCCCATTCCT GGTTTGTAAA CCTATACCGT GCCAATTACG GCAAACTCAG CTGGATGAAT
AATCCCGCTA CTTTCGGTTC CGAAGCGTTT ACCGTATGGG ATTATTATGG ACATGGAGGT
TATGGTTCGT ATAAGTATTA TGACCAATTC AACTGGTTTG GTTATTCCTT TGGCTATCAC
TATGGCGGCC GTACACGCAA TGGAGAGCTG CGTAAAAAAT CAGCACCTGG CGGCGGCGGG
GAACTTCACG AAGAGGCGGA AATGGATATG GCAGCCCCAA TGATGTCGGC TGTTGCAAAA
GAAGAATCCA GAAATGAACG TGTAAATTTT CTTCCGCCTG TTGTAAAAGC AGATTCAGAA
GTGCTTGCTG TGAAAGAACC TGAAGCGGTT GAACAGCCTG CGATCCGGAA AGATTTCCGT
GAAACGGCTT TCTTTTTCCC GGATCTGAAA ACAGATGCTG AAGGCAATGT AGTGTTAAAC
TTCACCATGC CGGAAGCACT CACACGCTGG AAAATGTTGG GGTTTGCGCA TACCAAAGAT
ATGAGCTACG GCTTCACGCA ACAGGAAGTG GTGACGCAGA AAGAGCTGAT GGTAGTGCCG
AATGCACCAC GTTTTTTACG TGAAGGAGAT CAGCTTGTTT TATCTGCAAA AGTAACAAAC
CTGAGCGGTG CACCAATGAA AGGTACAGTA ACACTACAGC TGTTTGATGC GGCAACCATG
CAGCCGATTG ATAAAGAATT AGGAAACACA GCACCATTGA AAGTATTTGG CGATGCCAAC
ACACCAAGCG AAGTTAAAAC ATGGTCGATC CAGGTACCGG GGGGCTTTCA GGCGATTACT
TACCGCGTAG TTGCCGCGGC AGGAAACTAT AGCGATGGCG AAGAAAACGT AATACCGGTA
TTTTCAAATC GCATGCTGGT AACAGAAAGC ATTCCAATGG TGATTACCAA AGGCCAGACC
AAAACATATA ATCTGGATAA ACTTGCCACC ACTACATCTA AAACACTTGT TAATCATCGT
CTGACCTTAG AGCTGACGCC AAATCCGGTA TGGTACGCCG TGCAGGCCTT GCCGTATCTG
GCGGAGTATC CGTATGAATG TGCGGAACAA ACGTTCAGCC ACTATTATGC AAATTCGCTT
GCAGGCTTTG TTGCCAACAG CAGTCCGGCC TTGAAACGCA TGTTTGACTT ATGGAAAAAA
ATGGAACCGG ATGCTTTGCT TTCAAATCTT GAAAAAAATC AGGAATTGAA AATGCTCTTG
CTGGAACAGA CACCTTGGTT ACGCGACGCA GAAAATGAGA CGGAACAGAA AAGACGTATC
GGTTTATTGT TTGACCTGAC GCGCATGAAC AGCGAACTTG ACCGTGCTAT CGGCAAGCTT
GAAAAAATGC AGCTGGGTAA CGGAGCGTGG CCATGGTTCA CCGGGATGCG CGAAGACCGT
TATATCACAC AGCATATTCT TATTGGTTTA GGCCATCTGA AACATTTAGG CGCACAGGGC
CGACATGATG AACAGATCGC AGACATGACC CGGAAAGCAC TGGATTACAG CGATGCAAAG
CTGCTGATGG ATTATAAAGA ATTAGTAAGA CGTGTACAGG TTGATAAACT TAAAATAGAA
GAAGTGCGTC CGTCGTCTCT TGAAGTACAT TATCTGTACG GAAGAAGTTT CTTTTCTGTA
AAAGCAGAAG GAGAACTTGC AACAGCCATT CAGTTTTACA AAGACCAGTC GCGCAAATAC
TGGACAGAAT ACGCCTTATA CGAGCAGGCT TTGATCGGAC TTACTGCCTA CCGCGATGGC
ACTACAACGT TCTCTGATGC GCTGCATAAA TCCTTTACAG AACGTGCAAT CAGTACAGAA
GATAAAGGCA TGTACTGGAA AACCAATCCG GGCTATTATT GGTATGAAGC GCCGATCGAA
CGCCAGGCAA TACTGATCGA ATTCTTTGAA GAAGCGGCTA AAGACCGTAT TTCTGTAGAT
AAAATGCGTT TCTGGCTGCT CACACAAAAA CAAACGACAC ACTGGAAAAC AACCAAAGCT
ACTACAGAAG CTTGTTATGC CTTATTGCTG AACGGAACTT CCTGGTTAAG CGCAGATGAA
AGCCTTACGG TACAGGTTGC CAATACCAAC GTAGTTTTCC CGAAAAGTGA ACTGAATCCT
ACGCTGACAA AAGTGTGGAA CACAACAGAG ATTAAACCAC AGATGGCTAA GGTAACATTA
AGCAAACAAG GTGAAGGTGT GGCATGGGGC GCCTTACACT GGCAATATTA CGAAGACCTC
GATAAGATCA CCACACATAA AAATGATCAG ATTCAATTAA CAAAAGAACT GATGCTTGAA
GTACAGACTG CCGGCGGTAA GGTATTGACC CCTATAACGG CTGCAACAAC TCTGAAAGCC
GGTGATCTGG TAAAAGTGAA ACTGGTGATC CGCTCAGACC GTGATCTGGA GTATGTACAT
GTACAGGACA TGCGTGCAGC AGGTTTCGAG CCCTTAAATG TATTATCCGG AGCAAAATGG
AACGGAAACT TTGGCTATTA TGAAAGCACC CGTGATGCTT CTACCGATTT CTTTATCGGG
TTCCTGCCAA GAGGTACTTA TGTGTTTGAA TACAGCCTGC GTGTGAATAA TGCAGGTAAC
TTCTCGAACG GCATTACCAA TATCCAGTGC ATGTATGCCC CTGAATTTAA TGCGCATTCA
CAGGGTATCC GAGTAGAAAT CAAATAG
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| Protein sequence | MRFLTLTILS FFTLTLAMAQ TDGMKQRWDK IDAYLNESLP KSALTDLTKL YSEAKEKKDA
DTQIKALMYI MRCTDMSEED AFEKDIAFIR KEIKTSAFPV NAVLESMLGE MYWQYFQRSR
YRSDISASTN ADDTDIQTWD LKTILEAAIN SYHASLKDKE LLLNYPTETL KEVIYKSSNH
VYTANLYDFL GKRALTFFQS SESSVSRPAE QFNLNDARYF SLPAVFTTLT IQSEDTLSLH
LYAMRLMQDL EKIHLNDSNP TVLVDLAISR LKFTSAHSGL PNAIELKLAA LENLEASSLP
YPISTEVSYE IAVIWHERAA DMSGLKNSPK YPDANIKSIQ TCDAAIKRFP GSEGANHCES
VKETILKPSL ELKLEEVNIP QAPFRTLVAY NNIKTLSLRV IRLTAEESEK LRNDLDYRYD
ERFESFKPYL DRTPVKKWSV GLPQDPQLRG HHTEVVIDPL AEGFYLIIAS DVEKIEKQKA
LFAYTFTTVS NISYVARTTE GKVQLYVLNR HTGKPIKDAQ VSAYTNEYNY ETHRNRKKVI
GIFPTDETGY TEVKAAKDSY SSYVNFDIKT KTDRLISDNR NSSGYYIYNE KHPTGNSFYH
TSMLVFTDRA IYRPGQTIYF KGIVFNTDVK NTYNVSKNTP VRIYFYDTNN KETAFADLVT
NEFGSVQGTF TAPVGSLTGS MHIGNDMGNA YFNVEEYKRP KFEVKIQPLT GQYKLNQEVE
VNALAKAYAG NAIDGAEVNY RVVRQVQIPY WYARYWGYRN PQETVIMTGK SVTDAAGAFS
IKFAALPDAS VSPESKSTFL YTVYADVIDI NGETHSDQLS VSIGYSSLVL NIQALAVVEK
GKPSACTFSA ANQSGEPEAA TIQVKVFKLA APAKALRERL WEAPDKPLLS EEAFRKLFPE
DVYANETDQE NFPQKLIFET TLQATKEKGA VWNVPENWET GQYLVKATAL DKDKTESETQ
TTFTKTDPSG SKLPYAMQKW TNVLPASTQP LQKAMFEIGS SFSDVHVICE VERDGVIIRK
EFITLKNDIK KFEQLITEAD RGGLAVHYVF VHNNRLYGGT ENISIPFSNK DVTIKWETFR
SKLQPGQAEQ WRVIINKKDG EKQAAEFLAT MYDASLDAFA SHSWFVNLYR ANYGKLSWMN
NPATFGSEAF TVWDYYGHGG YGSYKYYDQF NWFGYSFGYH YGGRTRNGEL RKKSAPGGGG
ELHEEAEMDM AAPMMSAVAK EESRNERVNF LPPVVKADSE VLAVKEPEAV EQPAIRKDFR
ETAFFFPDLK TDAEGNVVLN FTMPEALTRW KMLGFAHTKD MSYGFTQQEV VTQKELMVVP
NAPRFLREGD QLVLSAKVTN LSGAPMKGTV TLQLFDAATM QPIDKELGNT APLKVFGDAN
TPSEVKTWSI QVPGGFQAIT YRVVAAAGNY SDGEENVIPV FSNRMLVTES IPMVITKGQT
KTYNLDKLAT TTSKTLVNHR LTLELTPNPV WYAVQALPYL AEYPYECAEQ TFSHYYANSL
AGFVANSSPA LKRMFDLWKK MEPDALLSNL EKNQELKMLL LEQTPWLRDA ENETEQKRRI
GLLFDLTRMN SELDRAIGKL EKMQLGNGAW PWFTGMREDR YITQHILIGL GHLKHLGAQG
RHDEQIADMT RKALDYSDAK LLMDYKELVR RVQVDKLKIE EVRPSSLEVH YLYGRSFFSV
KAEGELATAI QFYKDQSRKY WTEYALYEQA LIGLTAYRDG TTTFSDALHK SFTERAISTE
DKGMYWKTNP GYYWYEAPIE RQAILIEFFE EAAKDRISVD KMRFWLLTQK QTTHWKTTKA
TTEACYALLL NGTSWLSADE SLTVQVANTN VVFPKSELNP TLTKVWNTTE IKPQMAKVTL
SKQGEGVAWG ALHWQYYEDL DKITTHKNDQ IQLTKELMLE VQTAGGKVLT PITAATTLKA
GDLVKVKLVI RSDRDLEYVH VQDMRAAGFE PLNVLSGAKW NGNFGYYEST RDASTDFFIG
FLPRGTYVFE YSLRVNNAGN FSNGITNIQC MYAPEFNAHS QGIRVEIK
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