Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2471 |
Symbol | |
ID | 4184420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2839147 |
End bp | 2841657 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072464 |
Product | hypothetical protein |
Protein accession | YP_679067 |
Protein GI | 110638858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0634001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATTATA ATTCATTAAG TGCTGCCGCG ATTCCGCCAT ATGGTGGTGA TGTTTTAGTT GAATTCGGAG ATGGGGAAAG CGCAAGAGTA TATAGAAGCG CGCCCATTGA TGTGGGCAAT AATACGTCTA AAAATGTATT TGTTACAAAA CATCTCTATG GTGGCCTGGG CAAATATATT GTGCGGATGA GTGAAGCTAA CCGCAATGGG AACATTGTAA ACATACCGAA CTCCGATTTT GTACGGTTTT ATGTAGAAAT GCAGATCTGG ATCAATTCTT CTTTTGGACT GAATGATAGC CCGGTTATGA CGGTACCGCC TGTTGATTTC GGGAACGTAA ATAAAATTTA CACACACAAC CCGGGGGCGT ATGATCCTGA TGGTGATAGT CTTTCATATG AATTAATTCC GGCACAAAGT AATATTGGTG CCCAGATTGC AGGATACAAT TATCCGGGAT CACCCGTGTT TGGCGGACAA AGCACGCTCG GCGGACCTGC TTTTCTTACG CTTAATGCGA GCACAGGTGA TATCGTATGG AATACACCTA GTGATGCAGG GGCTGTACCG AGATATTACA ATCTTGCCAT AAAGATTACG GAATGGAGGT ATGGCACGGC AATCGGTTAC ATTGTGCGCG ATATGCAGAT TGAAATAAAA CAGGAAGATA ATTTTCCCCC TGTACTGGCA ATGCCAAAAG ATACCTGTAT TGAAGCAGGT AAATTATTGC TTTCAACGGT TTCCGCCTCT GATCCGGATG GGAATAGAGT GAAACTTGAA GCGTATGGAC AAACCTTTGA ATTGAGTGCT CCGTCTGTAA AATCAACGTT TCCAACTATT GGCCCCGTTA TCAATCCAAC CGGTCAGTAT ACCTGGCAAA CACGCTGCTC GGATGTGCGC AGACAACCGT ATCAGGTAAT CTTCAAAGCA AGCGATCAGG ATGCAACACC TATTTTAACC GATGTGCGTA CGTGGCTGAT TTATGTGAAA GGTCCTAAAA TAACCGGCGT CACTGCAACA CCGGGTTTTG ATTTTGTTAC CTTAAACTGG TCTCCTTATA CCTGCAGTGC AGATGCTACT AAAATTAATA TCTACCGGAA AGACTGTGAT CCGGCAGTAC CTGTATCAGA CCCTTGTACT ACAGGTCCTT TAGCCGGCTA TGTACTGGTT GGAAACGCGA AAGGTACAGA CATTACATTC ACAGATACGA ATAAAGGCAC AGGATTGAGC AAAGGCAAAT CGTATTGTTA TATACTGGTT GCTGAATACC CGGCACCAGC GTATGGCGAA AGTTATCCTT CAGATCAGGT ATGTGCGCAG CTGAACCGGG ATGTTCCTGT ATTTTCACAG ATGGATGTAA CTGTAACATC TGCCACAGCC GGTGAAGTGT TTTTGAAATG GTACAAACCT TCAGCAGCAA GTGTTCCCGG GTCATATACC TATGATGTAG AAAGAGGTGT TGGTTTAAAT CCAACTACAT TTACAACGAT TGCTGCGGGT ATCAGTGACA CGGTATACAC CGACACAAAC ATTGATACCA AAAACACCAT TTATTCTTAC CGAATAAAAC TGTTAAACAA CAACCTGAAA ACAACTTATG TTCCGCTGTT CGATTTAACA GCAGTGGCAG GCAATGCACA GGCAATACTC AACTGGACCT ATAAAACACC TTGGACAACA GATTCTGTGC AGATATACAG AAAAATAAAT GTTGCCGGTA CCTTTACCAA ATTGATTACG CTGCCAAGTT CAGCGGTTAC CTATACAGAT AATGCTGTTA CGAATTGTGA TACGGTATAT TACTATTTAC ACCAGTATGG CTCTTATTGC GACGATGCCT TAAAAGCCAT TGCTACACAG ATTTCAGCCA TTGATTCCGT TCTTCCGCTG GATGATAATC CTCCGCCTGC GCCTGCATTA TCAGTAGTTG GCTGTAATGG AGATATTACG GTATTTCAGA ATGTATTAAA CTGGACAAAT TTATCAAACC CGCAATGTGA TATCATTGAT CATTATAACA TTTATTTTGC TACACATAAT ACAGATGAAT TAGGTTTGCT GCGTACAATT CCAACAGGTA CGACAACATA TACACACATA AACATGCAGA CAACGGCTGG CTGTTATCAG GTTTCAGCAA CCAATGTTGC CGGAGTGGAA GGAGCCAGAA GTGATAAAAT CTGTGTGGAC GATTGTGTTG ATTACAGGCT TCCCAATTTG CTTACCATCA ATAACGATGG GTTTAATGAC TTGATGAGAC CGTTTGATGT TCCGCAAGGT GCACCAAGAG GAGCAGAGCT TGTACGTTTC TCTGTCTATA ACTGCTGGGG AGCGCTTGTG TTTTTTAAAG ATACAGACCC TAATATTATG TGGAACGGTT CTTTAAATGG TACGCCGCTT TCAGATGGTA TTTATTATTA CAATGCAGAG GTTCATTTCT ATGGACGTGT GAATAAAGAC GATGAAGTAA AAAATCTTAA GGGATGGGTA CAGTTACTGA CAACAAAATA A
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Protein sequence | MYYNSLSAAA IPPYGGDVLV EFGDGESARV YRSAPIDVGN NTSKNVFVTK HLYGGLGKYI VRMSEANRNG NIVNIPNSDF VRFYVEMQIW INSSFGLNDS PVMTVPPVDF GNVNKIYTHN PGAYDPDGDS LSYELIPAQS NIGAQIAGYN YPGSPVFGGQ STLGGPAFLT LNASTGDIVW NTPSDAGAVP RYYNLAIKIT EWRYGTAIGY IVRDMQIEIK QEDNFPPVLA MPKDTCIEAG KLLLSTVSAS DPDGNRVKLE AYGQTFELSA PSVKSTFPTI GPVINPTGQY TWQTRCSDVR RQPYQVIFKA SDQDATPILT DVRTWLIYVK GPKITGVTAT PGFDFVTLNW SPYTCSADAT KINIYRKDCD PAVPVSDPCT TGPLAGYVLV GNAKGTDITF TDTNKGTGLS KGKSYCYILV AEYPAPAYGE SYPSDQVCAQ LNRDVPVFSQ MDVTVTSATA GEVFLKWYKP SAASVPGSYT YDVERGVGLN PTTFTTIAAG ISDTVYTDTN IDTKNTIYSY RIKLLNNNLK TTYVPLFDLT AVAGNAQAIL NWTYKTPWTT DSVQIYRKIN VAGTFTKLIT LPSSAVTYTD NAVTNCDTVY YYLHQYGSYC DDALKAIATQ ISAIDSVLPL DDNPPPAPAL SVVGCNGDIT VFQNVLNWTN LSNPQCDIID HYNIYFATHN TDELGLLRTI PTGTTTYTHI NMQTTAGCYQ VSATNVAGVE GARSDKICVD DCVDYRLPNL LTINNDGFND LMRPFDVPQG APRGAELVRF SVYNCWGALV FFKDTDPNIM WNGSLNGTPL SDGIYYYNAE VHFYGRVNKD DEVKNLKGWV QLLTTK
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