Gene CHU_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2471 
Symbol 
ID4184420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2839147 
End bp2841657 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content42% 
IMG OID638072464 
Producthypothetical protein 
Protein accessionYP_679067 
Protein GI110638858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0634001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATTATA ATTCATTAAG TGCTGCCGCG ATTCCGCCAT ATGGTGGTGA TGTTTTAGTT 
GAATTCGGAG ATGGGGAAAG CGCAAGAGTA TATAGAAGCG CGCCCATTGA TGTGGGCAAT
AATACGTCTA AAAATGTATT TGTTACAAAA CATCTCTATG GTGGCCTGGG CAAATATATT
GTGCGGATGA GTGAAGCTAA CCGCAATGGG AACATTGTAA ACATACCGAA CTCCGATTTT
GTACGGTTTT ATGTAGAAAT GCAGATCTGG ATCAATTCTT CTTTTGGACT GAATGATAGC
CCGGTTATGA CGGTACCGCC TGTTGATTTC GGGAACGTAA ATAAAATTTA CACACACAAC
CCGGGGGCGT ATGATCCTGA TGGTGATAGT CTTTCATATG AATTAATTCC GGCACAAAGT
AATATTGGTG CCCAGATTGC AGGATACAAT TATCCGGGAT CACCCGTGTT TGGCGGACAA
AGCACGCTCG GCGGACCTGC TTTTCTTACG CTTAATGCGA GCACAGGTGA TATCGTATGG
AATACACCTA GTGATGCAGG GGCTGTACCG AGATATTACA ATCTTGCCAT AAAGATTACG
GAATGGAGGT ATGGCACGGC AATCGGTTAC ATTGTGCGCG ATATGCAGAT TGAAATAAAA
CAGGAAGATA ATTTTCCCCC TGTACTGGCA ATGCCAAAAG ATACCTGTAT TGAAGCAGGT
AAATTATTGC TTTCAACGGT TTCCGCCTCT GATCCGGATG GGAATAGAGT GAAACTTGAA
GCGTATGGAC AAACCTTTGA ATTGAGTGCT CCGTCTGTAA AATCAACGTT TCCAACTATT
GGCCCCGTTA TCAATCCAAC CGGTCAGTAT ACCTGGCAAA CACGCTGCTC GGATGTGCGC
AGACAACCGT ATCAGGTAAT CTTCAAAGCA AGCGATCAGG ATGCAACACC TATTTTAACC
GATGTGCGTA CGTGGCTGAT TTATGTGAAA GGTCCTAAAA TAACCGGCGT CACTGCAACA
CCGGGTTTTG ATTTTGTTAC CTTAAACTGG TCTCCTTATA CCTGCAGTGC AGATGCTACT
AAAATTAATA TCTACCGGAA AGACTGTGAT CCGGCAGTAC CTGTATCAGA CCCTTGTACT
ACAGGTCCTT TAGCCGGCTA TGTACTGGTT GGAAACGCGA AAGGTACAGA CATTACATTC
ACAGATACGA ATAAAGGCAC AGGATTGAGC AAAGGCAAAT CGTATTGTTA TATACTGGTT
GCTGAATACC CGGCACCAGC GTATGGCGAA AGTTATCCTT CAGATCAGGT ATGTGCGCAG
CTGAACCGGG ATGTTCCTGT ATTTTCACAG ATGGATGTAA CTGTAACATC TGCCACAGCC
GGTGAAGTGT TTTTGAAATG GTACAAACCT TCAGCAGCAA GTGTTCCCGG GTCATATACC
TATGATGTAG AAAGAGGTGT TGGTTTAAAT CCAACTACAT TTACAACGAT TGCTGCGGGT
ATCAGTGACA CGGTATACAC CGACACAAAC ATTGATACCA AAAACACCAT TTATTCTTAC
CGAATAAAAC TGTTAAACAA CAACCTGAAA ACAACTTATG TTCCGCTGTT CGATTTAACA
GCAGTGGCAG GCAATGCACA GGCAATACTC AACTGGACCT ATAAAACACC TTGGACAACA
GATTCTGTGC AGATATACAG AAAAATAAAT GTTGCCGGTA CCTTTACCAA ATTGATTACG
CTGCCAAGTT CAGCGGTTAC CTATACAGAT AATGCTGTTA CGAATTGTGA TACGGTATAT
TACTATTTAC ACCAGTATGG CTCTTATTGC GACGATGCCT TAAAAGCCAT TGCTACACAG
ATTTCAGCCA TTGATTCCGT TCTTCCGCTG GATGATAATC CTCCGCCTGC GCCTGCATTA
TCAGTAGTTG GCTGTAATGG AGATATTACG GTATTTCAGA ATGTATTAAA CTGGACAAAT
TTATCAAACC CGCAATGTGA TATCATTGAT CATTATAACA TTTATTTTGC TACACATAAT
ACAGATGAAT TAGGTTTGCT GCGTACAATT CCAACAGGTA CGACAACATA TACACACATA
AACATGCAGA CAACGGCTGG CTGTTATCAG GTTTCAGCAA CCAATGTTGC CGGAGTGGAA
GGAGCCAGAA GTGATAAAAT CTGTGTGGAC GATTGTGTTG ATTACAGGCT TCCCAATTTG
CTTACCATCA ATAACGATGG GTTTAATGAC TTGATGAGAC CGTTTGATGT TCCGCAAGGT
GCACCAAGAG GAGCAGAGCT TGTACGTTTC TCTGTCTATA ACTGCTGGGG AGCGCTTGTG
TTTTTTAAAG ATACAGACCC TAATATTATG TGGAACGGTT CTTTAAATGG TACGCCGCTT
TCAGATGGTA TTTATTATTA CAATGCAGAG GTTCATTTCT ATGGACGTGT GAATAAAGAC
GATGAAGTAA AAAATCTTAA GGGATGGGTA CAGTTACTGA CAACAAAATA A
 
Protein sequence
MYYNSLSAAA IPPYGGDVLV EFGDGESARV YRSAPIDVGN NTSKNVFVTK HLYGGLGKYI 
VRMSEANRNG NIVNIPNSDF VRFYVEMQIW INSSFGLNDS PVMTVPPVDF GNVNKIYTHN
PGAYDPDGDS LSYELIPAQS NIGAQIAGYN YPGSPVFGGQ STLGGPAFLT LNASTGDIVW
NTPSDAGAVP RYYNLAIKIT EWRYGTAIGY IVRDMQIEIK QEDNFPPVLA MPKDTCIEAG
KLLLSTVSAS DPDGNRVKLE AYGQTFELSA PSVKSTFPTI GPVINPTGQY TWQTRCSDVR
RQPYQVIFKA SDQDATPILT DVRTWLIYVK GPKITGVTAT PGFDFVTLNW SPYTCSADAT
KINIYRKDCD PAVPVSDPCT TGPLAGYVLV GNAKGTDITF TDTNKGTGLS KGKSYCYILV
AEYPAPAYGE SYPSDQVCAQ LNRDVPVFSQ MDVTVTSATA GEVFLKWYKP SAASVPGSYT
YDVERGVGLN PTTFTTIAAG ISDTVYTDTN IDTKNTIYSY RIKLLNNNLK TTYVPLFDLT
AVAGNAQAIL NWTYKTPWTT DSVQIYRKIN VAGTFTKLIT LPSSAVTYTD NAVTNCDTVY
YYLHQYGSYC DDALKAIATQ ISAIDSVLPL DDNPPPAPAL SVVGCNGDIT VFQNVLNWTN
LSNPQCDIID HYNIYFATHN TDELGLLRTI PTGTTTYTHI NMQTTAGCYQ VSATNVAGVE
GARSDKICVD DCVDYRLPNL LTINNDGFND LMRPFDVPQG APRGAELVRF SVYNCWGALV
FFKDTDPNIM WNGSLNGTPL SDGIYYYNAE VHFYGRVNKD DEVKNLKGWV QLLTTK