| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2462 |
|---|
| Symbol | |
|---|
| ID | 4184411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2827459 |
|---|
| End bp | 2828475 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_679058 |
|---|
| Protein GI | 110638849 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0923403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATGC TGAAAATGTA TATCTGTTTG CTATCGTTCT TTCTTTGCAG TATACATGTG
TTTGCACAAG ATCCACAATA TTCCCAGTCG TATGCGAATG CCTTATATTT AAGTCCGGCG
TTTGCAGGCG CAGAACAAAA TACACGTGGC ATATTTGCTA CCCGTTACCA ATGGCCCGGT
ATAGATGCTT CTTTTATATC GAATACATTT TCTGCCGATC ATTATATAGA CCGCTATAAA
AGCGGTATTG GCTTTATTGC AACTTCTGAT TTTTCTACAG CAGCTAAGCT GCGTTCTACA
GAAGCAGGAT TAATCTATGC TTTTCAGGCA GACATTTCAA AAAAACTTGT CTTCAGGCCG
GCACTGCAGC TTTCATATGT AAACCGAAGC ATTAATTTTA ACCGGCTCAC ATTTGGTTCT
CAATACACCA ACGATGGATT TGCAGGCGGT GCATCGAATG AAACGTCAAA CATTCCAACC
GTTTCGTATC TGGATGTTTC TGCCGGCGGT CTGTTATATG CAAAAAATTA TTGGATCGGA
ATTTCCGTAA ATCATTTGAA TACGCCTGAA CAAACATTCA TGAAAGGCCA AAGCCCGCTG
CCAATCAAAG GTTCTTTATT CGGAGGATAT AAATTTTCAT TTACACCTGA ATGGAAAAAG
AAACATGTGA ATCCGGACGA AGAAAAAAGC ATTACCCCAA CGTTCATTTA TAAAATGCAG
GGAAAATCCG ATCAGCTTGA CATTGGGCTG TACGGGCAAT ACAATGTACT GGTCGTTGGC
TTTTGGTACA GAGGAATTCC TGTTAAACTG TATGCCCCGG AGCGAACAAA TCATGATGCG
TTAATTTTCC TTGTAGGCTT TTTACACAAA GGTTTTGCCA TGGGGTATAG TTACGATTAT
ACCATATCAA AACTTGCACG CATTTCAGGA GGCGCACATG AGCTGACACT ATCCTATGGA
TTTAAAACAA AAAAAGCGAA GCGTATACAA AAACGTGCCG TGTGTCCGAA ATTCTAG
|
|---|
| Protein sequence | MHMLKMYICL LSFFLCSIHV FAQDPQYSQS YANALYLSPA FAGAEQNTRG IFATRYQWPG
IDASFISNTF SADHYIDRYK SGIGFIATSD FSTAAKLRST EAGLIYAFQA DISKKLVFRP
ALQLSYVNRS INFNRLTFGS QYTNDGFAGG ASNETSNIPT VSYLDVSAGG LLYAKNYWIG
ISVNHLNTPE QTFMKGQSPL PIKGSLFGGY KFSFTPEWKK KHVNPDEEKS ITPTFIYKMQ
GKSDQLDIGL YGQYNVLVVG FWYRGIPVKL YAPERTNHDA LIFLVGFLHK GFAMGYSYDY
TISKLARISG GAHELTLSYG FKTKKAKRIQ KRAVCPKF
|
|---|
| |