| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2387 |
|---|
| Symbol | |
|---|
| ID | 4183818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2748756 |
|---|
| End bp | 2749814 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638072383 |
|---|
| Product | choloylglycine hydrolase family protein |
|---|
| Protein accession | YP_678986 |
|---|
| Protein GI | 110638777 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3049] Penicillin V acylase and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0389059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAT TTTTTTTAAA AACCATTTTA GCTGCGTTCT GTGTGTATGT GCCAGCTATT
TTAAACACGG CCTATGCGTG TACAAGAATT GTGTATCAAG GACCAAATGG TACCATTATC
ACAGCCAGGT CCATGGATTG GAAAGGGGAG ATTCCTGCTA ATCTCTGGAT CTTTCCCCGG
GGTATAGAGC GCAACGGCGA AGCAGGAAGT ACTTCTGTGA AATGGAAATC AACATATGGA
AGTGTTATAA CGAGCTCCTG GGATATTGCA TCCTCTGATG GAATGAATGA AAAAGGTCTT
GTAGGAAATT TACTTTGGCT TGTTGAATCA ACTTATCCGA AATTTGTGAA AGACAAAGAC
AAGCCCGGTC TGGCTGTTTC GCTTTGGCTG CAATATGTAT TGGATAATTT TGCAACTGTT
TCCGAAGCTG TTGCATTTCT GGAAAAGGAG CCGTTTGTAG TTGCTTCTTC TCATATTCCC
GGAACCGCTA TTTTTGCTAC GGTACACTTA TCTATATCTG ATGCCACAGG CGATAATGCA
ATCTTTGAAT ATATCGGCGG CAAGCTGGTC ATACATCACG ACCGGTCTTA TGTAACCATG
ACAAACTCGC CGGTTTTTGA TGAACAGCTT GCTATAAACA CGTATTGGAA AAACATTCCC
GGTACGGTTA TGCTGCCTGG AACCAATAGA GCTGCCGATA GATTTGTTCG CGCATCGTAT
TATATTGATG CCATACCAAA GACAGACAAT ACCCGTGTAG CGTTACCAAG CGTGTTTAGC
GTAATACGGA ATTGTTCGGT ACCATTGGGT ATTTCTTCTG AGGCAGAACC TAATATTTCA
TCCACACGCT GGAGAACGGT ATCGGATCAA AAGAACCTTG TGTATTATTT TGACAATGTT
TTGAATCCGA ATGTTGTCTG GGTTGAATTC AGCAAAATAG ATTTCAGTGA AAAAGCAAAA
GTAAAGAAAC TAACCTTAGC GAATAATGAA AATTATTCAG GAGAGGCTTC AATGAATTTT
AAAGCTGCAC TGCCTTTTAC ATTTGCGGGA TTGGATTAA
|
|---|
| Protein sequence | MKRFFLKTIL AAFCVYVPAI LNTAYACTRI VYQGPNGTII TARSMDWKGE IPANLWIFPR
GIERNGEAGS TSVKWKSTYG SVITSSWDIA SSDGMNEKGL VGNLLWLVES TYPKFVKDKD
KPGLAVSLWL QYVLDNFATV SEAVAFLEKE PFVVASSHIP GTAIFATVHL SISDATGDNA
IFEYIGGKLV IHHDRSYVTM TNSPVFDEQL AINTYWKNIP GTVMLPGTNR AADRFVRASY
YIDAIPKTDN TRVALPSVFS VIRNCSVPLG ISSEAEPNIS STRWRTVSDQ KNLVYYFDNV
LNPNVVWVEF SKIDFSEKAK VKKLTLANNE NYSGEASMNF KAALPFTFAG LD
|
|---|
| |