| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2365 |
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| Symbol | |
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| ID | 4186195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2725749 |
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| End bp | 2727458 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072362 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_678965 |
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| Protein GI | 110638756 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.505593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC TAACAAGTCT TTTTATACTC ATCCCCGTTT TTATATTGGG TTTCTTTCTG
TTAAGTCAGG CACAGAACCC GATGAAGTAT ACCTACCTAT TTCGAAATGT GATATTAAGC
AAATCGAAAA ATTTTGAACT CGCACCGGTG TTACGCGGAC GGGTTTATTA CCCGCGTTAC
TTCTATATTC CTGCTCTAAA TCAATACATG GTCTATTCAG ACTTAGATGA AACAGGGCCT
TTTAAAATAT ATGAACATAC CAGTAAATCC GAAGGCAAAG CATATGCACT GCTGGATGAT
AAAGGAACAA ATGTTATTAC ATTTGAAACA CCTTTACGTT TCTCCTACCG CAGCGGCTGT
TTTTACGGGC CACACACCTA TATTCCTTTT TTAGAAACAG GTAAAACAGA TACACTTCGC
TATCATCAGA TCCATAATGA AAAACTGGAC CTGGGCTCAA AAGCATTTGA AAAACTTTTT
ATGGAATTGT ATGCAACGTC TGAATATATT GAGTTTATAA ATCTCCGTGC CTCGCGCGAC
GACATCCATC AGGCAGCTGT AATTTTCAAA CGTGGCGGTA AGGTTGAAAT CCTGCTTTCC
GGCTTACGCG ATAGCCGCAT GATCTGCAAT TATCAGGAAG ATCGTACCAT CAATAACTTT
GATGATTATT ACACCCCGGA TATACGTAAC AAGGAAAACT TTCCGCAGTC ATCGGCGGCA
ATCGAAATGA TTCCGCTTGT AACCGAAAAT ACCAATCCCT TTGTTTACTG GAGAACAGGT
TTCAATCAAA CCTTTCACAT GAAAAGATAC CGAAAAGAAT ATTCTTCCGG CTGGCAGGGC
ATTATGAAAG TTGGAGTGAT TCCGGTATAT GTACCCGGTG AAAGTTCCGG TACGGTATAT
ATAAACTTTA AAACGAACGG AGAACTCTTC AAAATTAAAA TCCTGGATGT AGAAAAAGCA
GATTACATTC CCGCCTATCA TTTAGGGCTC CGCACCTTTG AACTCCCGGC AAATATTCGC
ACAAAAAACT CATTGGTATT TATGGAATCG GTTCAGAATT CAGGGGACAA TCGCTTGGGC
GGCGGTGTAT TTGTTGTGCG CACGGCAACA ACAAGCAATC CTTCTGACGA TATTCCTTCA
GATATGACAG AGAAAGAATT CAGCGCATTG CCTTTAACAT TACAGGTTGC ACTGCTTGAT
CCGGAACATA CAACAAGTCT GAAAATATAT GCAGAAAATT GTAACGAATG GATTCCTGAA
ATTGAACGTT TGAAAAATCT TGAACATTTG GAAATGACAA CGGGCATGAC TGAAATTCCA
GATGCAATAA CAACGTTTAC CAAACTGCAA TCGCTATCCA TCACGTACGG AAACATTCAT
ACCGTATCTC CTAAAATAGC CGAGCTCACC GCGCTTATAA ACATTGACCT GTTTTCAAAT
AAGCTAACAG AATTTCCACA CGTATTTTTA GAAATGGAAC AATTGGAACG ATTAAAGATC
GGCGCTAACC CTATCCCTTC ATTACCGGAA GACATTGACC GGTTAAAAAA CTTAACGTAT
CTAAGTCTTA CGTTAACCAA TGTCACTGTC TTACCGAAAT CCATGATCGG AATGGAAAAG
CTATACATAG ACAATATGGG AATGGAAAAT AACGTGCCGG ATGTATATAA GCAGTTGTTT
GACTATACAA AAATCAAAAC ATTTTATTAA
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| Protein sequence | MLKLTSLFIL IPVFILGFFL LSQAQNPMKY TYLFRNVILS KSKNFELAPV LRGRVYYPRY
FYIPALNQYM VYSDLDETGP FKIYEHTSKS EGKAYALLDD KGTNVITFET PLRFSYRSGC
FYGPHTYIPF LETGKTDTLR YHQIHNEKLD LGSKAFEKLF MELYATSEYI EFINLRASRD
DIHQAAVIFK RGGKVEILLS GLRDSRMICN YQEDRTINNF DDYYTPDIRN KENFPQSSAA
IEMIPLVTEN TNPFVYWRTG FNQTFHMKRY RKEYSSGWQG IMKVGVIPVY VPGESSGTVY
INFKTNGELF KIKILDVEKA DYIPAYHLGL RTFELPANIR TKNSLVFMES VQNSGDNRLG
GGVFVVRTAT TSNPSDDIPS DMTEKEFSAL PLTLQVALLD PEHTTSLKIY AENCNEWIPE
IERLKNLEHL EMTTGMTEIP DAITTFTKLQ SLSITYGNIH TVSPKIAELT ALINIDLFSN
KLTEFPHVFL EMEQLERLKI GANPIPSLPE DIDRLKNLTY LSLTLTNVTV LPKSMIGMEK
LYIDNMGMEN NVPDVYKQLF DYTKIKTFY
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