| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2276 |
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| Symbol | ispB |
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| ID | 4186664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2649686 |
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| End bp | 2650666 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638072277 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_678880 |
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| Protein GI | 110638671 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA TACGCTTAGA TGATATAAGA AATGTTGTGA AAGACGACAT GAAGGACTTC
GAAAAGAAGT TCCGTGATTC AATGAAATCC AAAGTGATGC TGTTGGATAA GATTATGTCG
TATATCGTAA AGCGCAACGG CAAGCAAATG CGGCCAATGT TTGTATTTTT ATCCGCTCAT
CTGGCAGGGA ATGTAAACGA CTCAACACAA CGCGGCGCCG CGCTCATCGA ATTATTGCAT
ACAGCAACGC TTGTGCACGA CGATGTGGTA GATGATTCAG ATTACCGTCG CGGAATGTTC
TCTATTAACG CACTCTGGAA AAATAAGATC GCTGTTTTGG TAGGCGATTA TCTGTTATCA
AAAGGTCTTT TGTTATCAAT CAATCACGGC GATTTCCATC TGCTGAAAAT TGTATCCAAT
GCGGTACGTG AAATGAGTGA AGGTGAGTTG CTGCAGATTG AAAAAGCCCG TAACCTGAAT
ATTAACGAAG AGATCTATTT TGAAATTATC CGTCAGAAGA CCGCTTCGCT GATTGCCTCC
TGCTGTGCTG TAGGTGTTTC TTCTACCGGT GCAGATGAAG CATTGGTAGA GCGTGCAAAA
ATGTTCGGGG AAAAAATCGG CATGGCGTTT CAGGTGAAAG ATGATCTGTT TGATTATGAA
ACATCTGAAA TGATCGGTAA ACCGGTAGGT ATCGACATTA AAGAACGCAA GATGACGCTT
CCATTGATTT ATGCCTTGAA TAAGGCAAGC TGGCTGGAGA AAAAACGGAT CATGTTTATT
ATCAAAAATC AAACGCATAA ATCGGCAAAG GTAAAAGAAG TGCTGCAGTT TGTGCGTGAG
TCCGGGGGCA TTGAATACAC ACGCACGGTA ATGGAAAATT TCAGAGAAGA AGCTTACGGA
TTTTTAGAAG AATTTCAGGA TTCCGTATAT AAAAAAGCGC TGCGTGACCT GGTAGATTAT
ACTATTGCGC GCAAACACTA G
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| Protein sequence | MSEIRLDDIR NVVKDDMKDF EKKFRDSMKS KVMLLDKIMS YIVKRNGKQM RPMFVFLSAH
LAGNVNDSTQ RGAALIELLH TATLVHDDVV DDSDYRRGMF SINALWKNKI AVLVGDYLLS
KGLLLSINHG DFHLLKIVSN AVREMSEGEL LQIEKARNLN INEEIYFEII RQKTASLIAS
CCAVGVSSTG ADEALVERAK MFGEKIGMAF QVKDDLFDYE TSEMIGKPVG IDIKERKMTL
PLIYALNKAS WLEKKRIMFI IKNQTHKSAK VKEVLQFVRE SGGIEYTRTV MENFREEAYG
FLEEFQDSVY KKALRDLVDY TIARKH
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