Gene CHU_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2250 
SymbolgpmA 
ID4183784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2622690 
End bp2623331 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID638072252 
Productphosphoglycerate mutase 
Protein accessionYP_678855 
Protein GI110638646 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0588] Phosphoglycerate mutase 1 
TIGRFAM ID[TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0293006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTT TAGTAATCGT CCGTCATGGC CAATCCGAAT GGAATCTGAA AAATCTTTTT 
ACAGGCTGGT CTGATGTAGA ATTGACACCA ACAGGAGAAC ATGAAGCAGA ATATGCGGGC
ATTGTATTGC GCCCGTATCA TTTTGATATT GCATTTACAT CGGTACTTAA ACGTGCCATT
CATACCTTAT CGATTATTCT GAACCAGACA GGTGCTACCA TTCCCATCAT AGAAAATGAA
GCACTCAATG AACGCAATTA CGGCGACTTA CAAGGGCTGA ACAAAGCAGA AGTAGGAGAG
AAGTATGGTG CGCAGCAGCT CATTGCGTGG CGCAGAAGTT ATACGGAAGT TCCGCCCGGT
GGGGAAAGTC TGGAAAATAC CTGTCAGCGT GTAATCCCTT ATTATCAGGA GAAGATAGAA
CCTGAATTAA AAGACGGGCG TAACGTATTG ATCGTTGCAC ATGGAAACAG CCTGCGTGCA
TTAATGATGC ATCTTGAAAA AATAAGTCCG GAAGATATTG CACACGTAGA CTTAGCAACA
GGTGCGCCAA GATTGTATGA ATTTTCGAGC AAATTAGATT TAAATTCTGT ATCTTATATA
AAGCTGCCTG AAACACCACT GGATGTTTCA ACGCTTCTAT AA
 
Protein sequence
MPILVIVRHG QSEWNLKNLF TGWSDVELTP TGEHEAEYAG IVLRPYHFDI AFTSVLKRAI 
HTLSIILNQT GATIPIIENE ALNERNYGDL QGLNKAEVGE KYGAQQLIAW RRSYTEVPPG
GESLENTCQR VIPYYQEKIE PELKDGRNVL IVAHGNSLRA LMMHLEKISP EDIAHVDLAT
GAPRLYEFSS KLDLNSVSYI KLPETPLDVS TLL