Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2250 |
Symbol | gpmA |
ID | 4183784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2622690 |
End bp | 2623331 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638072252 |
Product | phosphoglycerate mutase |
Protein accession | YP_678855 |
Protein GI | 110638646 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0293006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATTT TAGTAATCGT CCGTCATGGC CAATCCGAAT GGAATCTGAA AAATCTTTTT ACAGGCTGGT CTGATGTAGA ATTGACACCA ACAGGAGAAC ATGAAGCAGA ATATGCGGGC ATTGTATTGC GCCCGTATCA TTTTGATATT GCATTTACAT CGGTACTTAA ACGTGCCATT CATACCTTAT CGATTATTCT GAACCAGACA GGTGCTACCA TTCCCATCAT AGAAAATGAA GCACTCAATG AACGCAATTA CGGCGACTTA CAAGGGCTGA ACAAAGCAGA AGTAGGAGAG AAGTATGGTG CGCAGCAGCT CATTGCGTGG CGCAGAAGTT ATACGGAAGT TCCGCCCGGT GGGGAAAGTC TGGAAAATAC CTGTCAGCGT GTAATCCCTT ATTATCAGGA GAAGATAGAA CCTGAATTAA AAGACGGGCG TAACGTATTG ATCGTTGCAC ATGGAAACAG CCTGCGTGCA TTAATGATGC ATCTTGAAAA AATAAGTCCG GAAGATATTG CACACGTAGA CTTAGCAACA GGTGCGCCAA GATTGTATGA ATTTTCGAGC AAATTAGATT TAAATTCTGT ATCTTATATA AAGCTGCCTG AAACACCACT GGATGTTTCA ACGCTTCTAT AA
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Protein sequence | MPILVIVRHG QSEWNLKNLF TGWSDVELTP TGEHEAEYAG IVLRPYHFDI AFTSVLKRAI HTLSIILNQT GATIPIIENE ALNERNYGDL QGLNKAEVGE KYGAQQLIAW RRSYTEVPPG GESLENTCQR VIPYYQEKIE PELKDGRNVL IVAHGNSLRA LMMHLEKISP EDIAHVDLAT GAPRLYEFSS KLDLNSVSYI KLPETPLDVS TLL
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