Gene CHU_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2222 
Symbol 
ID4185782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2582913 
End bp2583809 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content39% 
IMG OID638072223 
Producthypothetical protein 
Protein accessionYP_678827 
Protein GI110638618 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0136128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAG AAGAACTAGG CGAGTACGGA AATCTTGAAT TACTAACTAA AAAGTTAGTG 
GACGGATTCA TAACAGGGAA ACATAAATCA CCTTATCACG GCTTTTCTGT TGAATTTGCA
GAACACAGAA ATTATAATCC GGGTGACAAT ACCCGTTTTA TTGATTGGAA AGTATATGCT
AAAACAGATA AGCTTTTTAC CAAGCGGTTT GATGAAGAGA CAAATCTTCG CTGTGTATTG
GCGTTAGACA TAAGTTCTAG TATGTATTTC CCCGAAAATA CAAACGACAA ACTCCGGTTC
AGTACCATTG CATGCGGTTC TTTAGCGAAT TTATTGCAAA GGCAGCGTGA TGCCTTTGGT
TTATGCCTGT TCAGCGATTC GATCGATTAC ATGAGCCAGA CGAAATCAAC GTCTATTCAT
TTACACAATA TACTTATACA GCTTCAGCAA ACGCTGGATA AACAGCCAGC GCAAAAAGTA
ACCCATCTGC CGGAAGTACT TCATTTGCTT GCAGAGCAGA TACACCGCCG GTCAATGGTT
GTTGTCTTTA CGGATTTTTT AGGTGAAGAT AAACGTATGG AAGAATTGTT CACTTCTCTG
CAACATCTGA AACACAACAA GCATGACATT ATTTTATTTC ATGTCTGGGA TTCACAGCAG
GAAGAATTGT TTGAATTGGA GGATCGTCCC TACCTATTGA CAGACGCGGA AAGCGGTGAT
CAGATAAAAA TTTATCCGCA GGAAATTAAA GAAGAATATT CGAAAAAAGT GCAGGCATAT
TTTTATGAAT TGAAACTCAA GTGCGGTGAT TATGGCATTG AATTTATTGA AGCCGATATC
CGAAAAAGCT TTGACCAGAT CTTTGTCCCG TTTTTGTTGA AGCGAAACGC GATCTAG
 
Protein sequence
MNLEELGEYG NLELLTKKLV DGFITGKHKS PYHGFSVEFA EHRNYNPGDN TRFIDWKVYA 
KTDKLFTKRF DEETNLRCVL ALDISSSMYF PENTNDKLRF STIACGSLAN LLQRQRDAFG
LCLFSDSIDY MSQTKSTSIH LHNILIQLQQ TLDKQPAQKV THLPEVLHLL AEQIHRRSMV
VVFTDFLGED KRMEELFTSL QHLKHNKHDI ILFHVWDSQQ EELFELEDRP YLLTDAESGD
QIKIYPQEIK EEYSKKVQAY FYELKLKCGD YGIEFIEADI RKSFDQIFVP FLLKRNAI