Gene CHU_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2188 
Symbol 
ID4183937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2543231 
End bp2544412 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content40% 
IMG OID638072189 
Producthypothetical protein 
Protein accessionYP_678793 
Protein GI110638584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC TCAAACACAT TCTTCTTTTT GCTCTTATAT ATATAAGCCT GAGCAGTTTT 
GCCCAAACAC CGGGAGTTGT TCCTACACCT TTTAAATCAG GCGAAAAATA CGGATATATT
GATGCACGTA CGGGTAAAGT GATGATCCTG CCGATTTACG ACCGCGTTGC TCCGTTTTCA
GAAAACCGTG CTTTGGTTTA CCGGATGGGC AAAGGGTATT TTATTGATCA GACAGGTACG
ATAAAGATTG TGGTCAAATA TGATTCAGCA ATGTCTTTTA CAGAAGCGTT TGCAGCGGTT
AAAGTAGCAG GATCCTGGGG CTTTATTGAT AAAATGGGGG GATTGAAAAT CCCGGCTAAG
TTTGAGGAAG CGTATCCGTT TTCAGAAGGC ATGGCTGTTA TCAAAAAAGG AGGCAAGTAT
GGGTACATTG ATAAGCTGGG AAAAGAAGTT ATTCCTGCTC AATTTGAATT TGCGATCGAA
TTTTCAGATG GCCTGGCAGC AGTAAAGAAG AATAACCTGT TTGGGTACAT CAATCCGAAA
GGCGCCTTTG TTATTCAGCC AACATTTGAA AAAGCAGGTA ATTACAGCAG CGGCGTTGCG
GTTGTTTCCA AAGGTGGAAA ATACGGTATT ATTGATAAAG CCGGCAAAAC AGTTTTGCCC
ATTGAACAGG ATTGGGTTTC AGTGTTTAAA GACGGGCTGC TGCGGGTACA AAAAAATGAT
ACCTGGGGTT TTGCCAATAC CTCAGGAGTT ATGCTGGTAC CGGCTATTTA TGATTGGGCC
GGGGATTTTT CAAATGGTTT TGCTAAAGTC AAAAAAAACA ATCTGTATGG ATACATTGAT
AAAACAGGTA CGGTATTTGT ACCTCTCATG TATCAATGGC TGGAAGACAT GGATGCGGAT
GGAGAGTTAA TGGCTGTTAA ATCAGGCTAT TGGGGTTGCA TCAATAGTAA AAATGAACAG
GTAACGCCAT TTACGTATAA AGTTATGCGC CCTTATTCAG AAGGCTATGC AGTGGTATCG
AAGTCAGGTA AATATGGTTA TCTGGATAAC AAAGGTAAAT TAATCATATC TTTTAATTAT
GAATATGCGT ATGACTTCAT TAACGGCTCT GCAGAAGTTG TTTTAAATGA AAAAACACGT
TTTATTGATA AAAGAGGTAC TTGTATTAAA TTCTGTGAAT AG
 
Protein sequence
MTVLKHILLF ALIYISLSSF AQTPGVVPTP FKSGEKYGYI DARTGKVMIL PIYDRVAPFS 
ENRALVYRMG KGYFIDQTGT IKIVVKYDSA MSFTEAFAAV KVAGSWGFID KMGGLKIPAK
FEEAYPFSEG MAVIKKGGKY GYIDKLGKEV IPAQFEFAIE FSDGLAAVKK NNLFGYINPK
GAFVIQPTFE KAGNYSSGVA VVSKGGKYGI IDKAGKTVLP IEQDWVSVFK DGLLRVQKND
TWGFANTSGV MLVPAIYDWA GDFSNGFAKV KKNNLYGYID KTGTVFVPLM YQWLEDMDAD
GELMAVKSGY WGCINSKNEQ VTPFTYKVMR PYSEGYAVVS KSGKYGYLDN KGKLIISFNY
EYAYDFINGS AEVVLNEKTR FIDKRGTCIK FCE