| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2163 |
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| Symbol | |
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| ID | 4184725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2514066 |
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| End bp | 2519534 |
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| Gene Length | 5469 bp |
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| Protein Length | 1822 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638072163 |
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| Product | DNA helicase |
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| Protein accession | YP_678768 |
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| Protein GI | 110638559 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.540092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA ACATTCAGTT ATTTAAAGAT TTTTTAGAAT CCGGATCAGA AATGGAACGT
TACGCAACGG ACGATATCAT TAGTTTTGTA TTGCCCTTGT TTAAAGAAGT AGTATCATTT
CACGAAATGG ATCTGGTGGC CCCTTTTGAA AAAGAAGAGG CGCTTTTTAT TACCGATCAT
TGTCTGGATA TAGATGAGAA GCTGGCGCAT GAACCGTTTT TTCAATTGAG CCGCGTATCT
GAACTGGTGG AAACAAAAAG TACGTTCTTT GATATTGTTG GTAAAGTAAA AATGGATACA
GATGTTGATA GCGGACGTCT GACACTTAAT AATTTAAACG TTCACCTCAA TATACAGGAG
CCGCTGTTAA ATCCTGCTTA CATAAAAGGA TACAAATGTT TTGAACAGCT GTTGGGCCAT
CACGATGCGC AAACGGATGT ATTCTGCCTG GGACTTATCC TGGGAAGTAT TTCTCTTGCA
CTGGATCTGT ATGATGAGGA AGATGTAAAA CTTTTTGCAC AATACAGAAC AAACCCGGTA
CAATACAACG GACGTCTGCA TCCTACTATT TCAGCTTTGA TCACAGAGAT GACCGAACTG
GACAGACGCA AGCGTACACC GGATCTGTAT GATGTTATTC ACCGCCTGAT CAATTACCGT
GATTACGATC CGGAAAAACA AACAGATCTT TCAACCGTTG CCGGCTGGAT GCATAAAGAA
TTAAAGGGCA AAAGTCAGTT CATTCTGAAT AAACTGCGCA ACAGGCTTTT TGATACCAGC
CGCCGGAACC GTTTGCTGTA TTATAAACCG AACATGCGTT TTGTAAATAT GACAGCCAGC
AGTGTGCCTG TTGTATTGCA TTATCAGAGC ATTCGCCCTG AACTGCTGTT TACCTGGAAC
AAAGAGATTT CAGGTAAAAT AAAAGGCATG AATGAAATTG TGCTGAATAA ATACCTGCGG
TTTGAAGATC ATCCGTATCT GCCTTCAGTA CTGGATAAGA TCCGGGTAGA GTCTCAGCGT
GATGTGCAGG AGTATGGTTT CAGTCAGCTG AAACTCGTGA TTGCATTTTT AAACTGGCAC
AATCTGAAAG AAGACACAGG TGAACGCATA CAAAGTCCGT TGCTGCTCAT TCCGGTTGAA
TTAAAGAAGA ATAAAAAATT AAAAGAAGAT CACTATGTAT TGAATGTACT GGCAAACGAA
GCAGAAGTAA ATCCTGTACT TGCAAATCAT TTGCGTGATC TGTATGGCAT TAAATTGCCT
GATTTTATTG ATCTGGATGA AATGAGCCCC GAACAGTTTT ATGCCTTATT AAAAGAACAG
ATCGAAGGTG CTAACCAGGG GATTTCATTA AACTACATTG ATAAACCACG CATAAAACTG
ATACAAAGCG TTGCAAGGCA AACCATAAAC AATTATAAAA AACGCCTGCG CCGTGGTACC
GGTACGTTTG ATACGTATAA AAATTTATCG TATAGCTATC AGACAGAAAG TTACAAGCCG
CTTGGTCTGG AGATCTTCAG GCAGCGCATA GAGCCACGCA GCACGTTTCT GGAGTTTCTG
ATCAATGATG ATATTAACCT CGCATCAAAT CAATTAACCG GCACTAAAAA GAGAGAACTT
TTTGAAATGG TGGAAAGTGA AAACAATCCA TACAGCTGGG ACTTTGATGT GTGTAATATT
GTACTCGGTA ATTTTAATTA TAAAAAAATG AGCCTTGTGC GGGATTACAA TGAAGTAATT
GAATCCGGCA TCAATCATAA CGTGTTTGAA GAATTATTCA GTTCGGAACC CAGGAAACAG
TCTGCACATA CATTTAATCT GAAAAATCTT TCAGACTGGA ACCATGTCAT CACAGCCGAT
CCTACACAGA CAAAAGCAAT TCTGCAGAGC CGTACCGGTG AAAGCTATAT CATACAGGGA
CCTCCTGGTA CCGGAAAAAG TCAGACGATC ACCAACCTTA TTGCTGATTT TGTAGCACAA
GGTAAAAAGG TACTTTTTGT TTGTGAGAAA CGTGCCGCGC TGGATGTGGT ATATTACCGC
TTAAAACAAC AGGGGCTGGA TGAACTCTGC TGTTACATTC ACGATAGCCA GAGTGATAAG
CGGGAGTTTA TTCAGAATTT GAAAGCGACG TACGAAGACT TTGTAAAAAA TAAAATGGAT
CTTGCAGCTA TTGCTGCAAA ACGCACGCAG CTGCTGGATA CTATGCTTGC ACAGCTCGGA
ATGATCGAAA AATTTCATCA GGCCCATCTG GATACACATG AACTTGCTGG AAATGAAATC
AGACAGTTAA TCCATCAGCT GATAGACCTG AAAGATTTTT TGCGTTCTTT TCCTTCAAAA
GATGAAGAAC TTATTCCGCA TTATAAATAC TGGGATGCTT TCGGAACAAT TGTTACTGAG
TTGGGAGAGG CTTTGGAAGA GTCGGGCGCA GAAGCAGTTT TTCAGGAACA TCCTTTCAGC
AAAATAAATG AAGCTGTATT TGTTTCTGAT CAGCCCTACA GCCTGCTTGA CCGGCTGCTT
ACAGAAGCAC AGGAGTATCT GAAACTGCTG GCTGCCGGTA TTCAACAGCA CAATATTGAG
GAACGGTACA CAAGCTTTCA TGTAATGAAG ATCATGGCTG AGGCTTCTGT AAAGCTGCAG
CCACTGAATG AATATGGTAA TTTTTATCTG CTGGATGTGA GTCATCCCGA TACAATTGCA
TTTGAGCGCA AGGTAACGGG GTATAAAAAA CGTATTGAGA AGCAGGAAGC GGCGCGTAAC
CATACACTCT TCTGGAAAAC GAAATTCAGC AAAGAAGATG TTATTCAGGG AATAGAAATA
GCTGCTGCAA AAGAATCGTC TTTCTTCCGT TTCTTTAGTG GTGCATGGAA AGCGTTAAAA
GCTCAGGTTG ATAACAGCTA TGATTTTTCA AAGCATCAGG TTAAGCCCCG GTACAAATAT
GTGCTGGAGC AATTACTGGC AGAATACAGT GCTGTAGAAG CCGTTTCGGA TATTGCAAAA
GAGATCGAAC AGCAATACCA TCTAACGGAT TTGCAAACGA TGTATGCGTT TATTGAACTG
ATCCGGACGA AGAAAGACAC TGCCGAGATT CAATATTTAT TACATGCAGC CAATTCAACT
GCGCTGGTGA AAGATCTGTC TAAACTGGCT GGAGTATTTT CACAACTTGA ACCTGTTTTG
CAGCAAGCGT TGAGCAGTTA TGCGCATACA ACCATTGGTA AATTACAGGA TGAACTGGAA
AGCATACAGA TAAATACAGA AGTCCTTTCG GAATTGTTAC CATCTTTGAA GGCATTTACA
GCAATTGATC CGCAGGTCAA GCGCATGCTT AAAACATTGC CGGTAACGCC CAGGGAAGCA
CAGGCCAGCA TGGCCAATAA AACCTTCAAC CATATTTCTC TGGAAAATAA AACATTTGCT
GTAACAGATT ATGCGGCAGT AGAAAAAGCC GTTCATGCTA TTCAGGTTTT ATATAAACAA
TTGTTGAAGC AGAATGCAGA TTTGATCCGC GCTTCAATCC GGAAGAATTT TCTGGATCAC
CTGGATTTAA GCAATATGGC GTTGAGTCAG CTTACCAGTG AACAGAAAAC ATTTAAGAAA
CAGTACAGTG AAGGAAGAAA AATTCTGGAG AATGAGTTTG CCAAAAGCAT GCGCTATAAA
AGTATCCGGG AACTTTCAGA AAAAGAAAGC GGAGAGGTAT TGAGGGATTT AAAACCGGTG
TGGCTGATGA GCCCGTTAAG TGTGAGCGAT AGCTTACCGT TGCAGGTTGC CTGCTTCGAT
GCGATTATTT TTGATGAAGC GAGTCAGATT ACCTTAGAAG AAGGAATTCC ATCGTTATAC
CGTGCACCAC AGATTATTAT TGTTGGTGAT GATAAACAAA TGCCTCCTTC TAATTTCTTT
ACCGCAAAAG CAGAAGACCC CGATGATCTG GATGAATACA CAGCGGAAGA AAACGATGAA
TTGCTTAGCA ACGATGCCGA CAGCTTACTT GCACAAGGCG CCCGTAAGCT GGATAGTGTT
ATGCTGGGAT GGCACTACAG AAGCCGCTAT GAAACACTGA TCAGTTTCAG TAACCATGCC
TTTTATAATG CCGGCTTACT GACCATTCCG GATAAGACAA TACATCATCA GGAAAAGCAG
GCAATCGTTG TTCAGAAAGC AGAAGAAGGT ACACAGCATG CAAGCGCTCT TTTCGACCGA
AGCATCAGTT ACCATTTCCT GCAGGACGGT TTGTATGAGA AACGTGCCAA TCTGGATGAG
GCCGATTACA TTGCTCATAT GGTACGTGAG ATCCTGAACC GCAATGTACC GGAAAGTATT
GGTATTGTTG CTTTCAGCCA GGAGCAGCAG CATGCCATTG AAGATGCCTT AACACGGCTC
GCATCAACCG ATAAGAATTT TGAAAGCCGT TTAGAAGCAG CGTATACACG CACGGAAGAA
GATCAGTTTA TCGGGTTGTT TGTAAAGAAT CTGGAAAATG TGCAGGGTGA TGAAAGAGAT
ATTATCATTA TGAGTGTGTG TTACGGATTT GACCGTAAAA AGAAAATGAT CATGAACTTT
GGTCCGATCA ATAAAAAAGG AGGAGAGAAG CGGTTGAATG TAATTTTCAG CCGCGCTAAA
AAGCACATGG CCATTGTAAG CAGCATCAAA CATTTCAACA TCAAAAACGA ATACAATGCC
GGTGCCAATT ACTTTAAGAA ATTCCTGCAT TATGCAGAGC TCATCAGCGA AGGAAATACT
GCAACGGCAA GAACCATACT GGATGGGCTT GTACGGGATA ATAAACAGAA GACTTTTGCA
CCGGGGAAAA ATAGTGTACT TGAACAAATA AAGCAGGCCC TTGAAAAAGA AGGCTACGAA
GTAGCCGCGT ATGTAGGCCA ATCCAGCTTT AAATGTTCAC TTGCTGTAAA AGCAAAAAAA
GAAGACACTG AATATACGTT AGGTATTTTG CTTGATGATG ATCTGCATTA CAGCAATGAA
AACCTGATGG AGCAGTATTT TCAACGTCCG GCTGTTCTGC AGAGTTTCGG CTGGAGAACC
ATTACACTGT TTGCTAAAGA CTGGTTTCAG CATCCCGATA GAGTGCTGCA GCAACTAATC
AAACGTATTA AAGAAGTACC TGTACCAACC GTTACAGAGA TTGAACCCGA TGCTGTACAA
ACTGCCGAAA AACCAAAGGA TGCTGCTGTA CCTGCCAGCG TTCAGTCAGA GGAGCCGGTT
AAAAAAGCTG AACTCCCGTC TGTATATGGT GATTTACTAT TTACAGAATT GATTTACAAA
GATGAAACCA GCCACAAATT CTGGAAAGTA GCTTTTGAAC ATACTTCCAA TAAACTGGTT
ATTTGTTTTG GACGTGCAGG AACAAAAGGA CAGACACAGG TGAAAACATT TGCATCGGCA
GAACTTGCCG AAAAGGAAAA AGAAAAAATG ATCCGTGAGA AGCAGAACAA AGGATATGTA
AACGTGTAG
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| Protein sequence | MEKNIQLFKD FLESGSEMER YATDDIISFV LPLFKEVVSF HEMDLVAPFE KEEALFITDH
CLDIDEKLAH EPFFQLSRVS ELVETKSTFF DIVGKVKMDT DVDSGRLTLN NLNVHLNIQE
PLLNPAYIKG YKCFEQLLGH HDAQTDVFCL GLILGSISLA LDLYDEEDVK LFAQYRTNPV
QYNGRLHPTI SALITEMTEL DRRKRTPDLY DVIHRLINYR DYDPEKQTDL STVAGWMHKE
LKGKSQFILN KLRNRLFDTS RRNRLLYYKP NMRFVNMTAS SVPVVLHYQS IRPELLFTWN
KEISGKIKGM NEIVLNKYLR FEDHPYLPSV LDKIRVESQR DVQEYGFSQL KLVIAFLNWH
NLKEDTGERI QSPLLLIPVE LKKNKKLKED HYVLNVLANE AEVNPVLANH LRDLYGIKLP
DFIDLDEMSP EQFYALLKEQ IEGANQGISL NYIDKPRIKL IQSVARQTIN NYKKRLRRGT
GTFDTYKNLS YSYQTESYKP LGLEIFRQRI EPRSTFLEFL INDDINLASN QLTGTKKREL
FEMVESENNP YSWDFDVCNI VLGNFNYKKM SLVRDYNEVI ESGINHNVFE ELFSSEPRKQ
SAHTFNLKNL SDWNHVITAD PTQTKAILQS RTGESYIIQG PPGTGKSQTI TNLIADFVAQ
GKKVLFVCEK RAALDVVYYR LKQQGLDELC CYIHDSQSDK REFIQNLKAT YEDFVKNKMD
LAAIAAKRTQ LLDTMLAQLG MIEKFHQAHL DTHELAGNEI RQLIHQLIDL KDFLRSFPSK
DEELIPHYKY WDAFGTIVTE LGEALEESGA EAVFQEHPFS KINEAVFVSD QPYSLLDRLL
TEAQEYLKLL AAGIQQHNIE ERYTSFHVMK IMAEASVKLQ PLNEYGNFYL LDVSHPDTIA
FERKVTGYKK RIEKQEAARN HTLFWKTKFS KEDVIQGIEI AAAKESSFFR FFSGAWKALK
AQVDNSYDFS KHQVKPRYKY VLEQLLAEYS AVEAVSDIAK EIEQQYHLTD LQTMYAFIEL
IRTKKDTAEI QYLLHAANST ALVKDLSKLA GVFSQLEPVL QQALSSYAHT TIGKLQDELE
SIQINTEVLS ELLPSLKAFT AIDPQVKRML KTLPVTPREA QASMANKTFN HISLENKTFA
VTDYAAVEKA VHAIQVLYKQ LLKQNADLIR ASIRKNFLDH LDLSNMALSQ LTSEQKTFKK
QYSEGRKILE NEFAKSMRYK SIRELSEKES GEVLRDLKPV WLMSPLSVSD SLPLQVACFD
AIIFDEASQI TLEEGIPSLY RAPQIIIVGD DKQMPPSNFF TAKAEDPDDL DEYTAEENDE
LLSNDADSLL AQGARKLDSV MLGWHYRSRY ETLISFSNHA FYNAGLLTIP DKTIHHQEKQ
AIVVQKAEEG TQHASALFDR SISYHFLQDG LYEKRANLDE ADYIAHMVRE ILNRNVPESI
GIVAFSQEQQ HAIEDALTRL ASTDKNFESR LEAAYTRTEE DQFIGLFVKN LENVQGDERD
IIIMSVCYGF DRKKKMIMNF GPINKKGGEK RLNVIFSRAK KHMAIVSSIK HFNIKNEYNA
GANYFKKFLH YAELISEGNT ATARTILDGL VRDNKQKTFA PGKNSVLEQI KQALEKEGYE
VAAYVGQSSF KCSLAVKAKK EDTEYTLGIL LDDDLHYSNE NLMEQYFQRP AVLQSFGWRT
ITLFAKDWFQ HPDRVLQQLI KRIKEVPVPT VTEIEPDAVQ TAEKPKDAAV PASVQSEEPV
KKAELPSVYG DLLFTELIYK DETSHKFWKV AFEHTSNKLV ICFGRAGTKG QTQVKTFASA
ELAEKEKEKM IREKQNKGYV NV
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