Gene CHU_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2114 
SymbolfabF 
ID4186320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2460682 
End bp2461746 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content44% 
IMG OID638072114 
Product3-oxoacyl-[acyl-carrier-protein] synthase 
Protein accessionYP_678719 
Protein GI110638510 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.576608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATAC AGAACGTTTA TATTAATGGC TTATCAGGGG TTTCTGCTCA GCCAACGTTT 
GACGAATCGT ATGTAGATGG AAATGTACAG ACAGAAACCA TTCCATACCG GAAAGTACTT
GACCCGGATT ATAAGCAATA TTTAAACCCC ACAGCGAGCA GACGCTTCAG CAGGCTCATT
AAGATGTCCC TGGTAGCGGC GCAGAAAAGC ATTGCTATGG CAGACGGCGT AATGCCCGAA
GCAATCATTA CAGGTACGGG CTTAGGTTGT CTGGAAGACA CGGAGAAGTT TTTAAAAGCA
TTGATCGAAA ACAACGAATC GATGCTTTCA CCAACTGCAT TTATTCAATC CACACACAAT
ACGATCAGCG GGCAGATCGC TATGATGATC ACGTGTTATT ACCCGAACTA TACGTATTCA
AACAGATATT TCACCTTTGA GTCATCACTG CTGGATGCTG TACTGATGCT GCTGGATAAG
AGCTGTAAGC ATGTATTGGT AAATGCAGCA GATGAGATCA TTCCTGCCGT GCATACGATC
GTAAAACGCA TGCATCTGTG GGACCGTGCG GAAGCTATTG CGCATAAAAA TGCGTTGGCT
GTAACTGCGG GAGAGGGTGT GGTAAGCATG ATGCTCTCTT CGGAGAAAAA AGAATCTTCG
GTAGCCGCCG TTAAAGCGCT GGAGCTGATT TATATATTAC CGAAGGATAC ATCTATTGAA
GCACACTTTA AAAAGTTTCT TGCAGAAGCT TCGTTAACAG CCGCCGATAT TGATGTATTG
GTATTGGGCA TGAACGGCGA TGCAGCAAGT GATGTGTATT ATGAACCGGT TCGTAATCTG
TTCAGCACGT CTACACACGT TGTATATAAA CACCATTTCG GTGAATCCTT CACCGCTTCT
TCGTTTGCGT ACTGGTTGGG CGCACAGCTG ATCCGTCATA AAAAGATAGA TGCATCGGTC
ATTCTTTCCG ATAAAGGACA CCGTGCCCCT AAACGTGTGC TGCTGTACAA TCAATCACAC
AATAAGTATC ATTCATTCTG TTTGCTGACA GATGTTGACC TATAA
 
Protein sequence
MLIQNVYING LSGVSAQPTF DESYVDGNVQ TETIPYRKVL DPDYKQYLNP TASRRFSRLI 
KMSLVAAQKS IAMADGVMPE AIITGTGLGC LEDTEKFLKA LIENNESMLS PTAFIQSTHN
TISGQIAMMI TCYYPNYTYS NRYFTFESSL LDAVLMLLDK SCKHVLVNAA DEIIPAVHTI
VKRMHLWDRA EAIAHKNALA VTAGEGVVSM MLSSEKKESS VAAVKALELI YILPKDTSIE
AHFKKFLAEA SLTAADIDVL VLGMNGDAAS DVYYEPVRNL FSTSTHVVYK HHFGESFTAS
SFAYWLGAQL IRHKKIDASV ILSDKGHRAP KRVLLYNQSH NKYHSFCLLT DVDL