| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2113 |
|---|
| Symbol | yheN |
|---|
| ID | 4186319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2459916 |
|---|
| End bp | 2460695 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638072113 |
|---|
| Product | GlcNAc deacetylase-related protein carbohydrate esterase family 4 protein |
|---|
| Protein accession | YP_678718 |
|---|
| Protein GI | 110638509 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.228742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACCT ATAAGACATT CCGCTACCTG TTCGGGAGCT TTTTTATTGC TACTGTTCTC
TACGGATCGC TGGTTTCACC ACTTCCATTC TGGGTATATC CCATGGAGAT TATGCTCTGG
ATGCTGTTCA TTATCTATGC CGCGTTTCGC ATGCGTGCCG GTATTTTTTT AACTTCGATC
TGTTCGCTCC CCAATGCATC TAAAAAGAAT ATTATCCTTA CGTTTGATGA TGGTCCGCAT
CCGGTATATA CGCCGCTGAT TCTTGAAGCA CTGAAAGCAA TGCATGCAAA AGCTGTTTTC
TTTTGCATCG GAAAAAACAT TGTGCAGTTC CCGGAACTGG CCAAACAGAT TGCTGCCGAA
GGCCATATTG TAGCCAATCA CAGTTATAAC CATTCCAACT TTATTGGCAT GTATGCGGCT
AAAAAAGTAG CAGAAGAAAT AGCAGCGACA GAACAGATTA TTCAGCAAAC CATCGGGCGT
ACGTATAAAC TCTACCGCCC GCCTTTTGGT GTAACCAATC CAAACATAGC TAAAGCTGTA
CAACGCTTGT CTATGCACTC CATAGGCTGG AATAAACGCT CGTTTGATAC GGTAAGCAAA
TCAACAGAAA AAGTGCTGAA CCGCATTAAG CCAAATCTGA AAAACGGGGA CATTATCTTG
TTGCACGATA CAAATGCACA TACACCGGTG ATTTTGGCTG AGTTTTTGTT GTTTGCCAAT
GCGAATGGGT TTATTTTTGA GCTTAATGAC ATACTCGATT TAAATAATTT AGATGAATAG
|
|---|
| Protein sequence | MLTYKTFRYL FGSFFIATVL YGSLVSPLPF WVYPMEIMLW MLFIIYAAFR MRAGIFLTSI
CSLPNASKKN IILTFDDGPH PVYTPLILEA LKAMHAKAVF FCIGKNIVQF PELAKQIAAE
GHIVANHSYN HSNFIGMYAA KKVAEEIAAT EQIIQQTIGR TYKLYRPPFG VTNPNIAKAV
QRLSMHSIGW NKRSFDTVSK STEKVLNRIK PNLKNGDIIL LHDTNAHTPV ILAEFLLFAN
ANGFIFELND ILDLNNLDE
|
|---|
| |