Gene CHU_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2112 
Symbol 
ID4186318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2459279 
End bp2459923 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content36% 
IMG OID638072112 
Producthypothetical protein 
Protein accessionYP_678717 
Protein GI110638508 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.769057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTT TCAGAAAATA TATTGGTATT GCCGTTTTTG TACTGCTGTG CTGTTCCATG 
GCCGGACAAA CTGATCCATA TGTGGCAATG AAAGATGTGG CTGGCTTCAA AACAAAACTT
AACCAGAAAA ATACATCAAT CACTTCCATG ACCTGTGATT TTGTACAGGA AAAGAGTTTG
TCTTTTATGG CTCAGAAAGT GATCTCTAAA GGGAACATGA AATATAAAAA GCCGGATATG
ATGAAGCTGG AATATACAAC GCCCTTTGTC TATATCATGT CTTTGTATAA AGGTAAAGTA
CTGATTAAAG ACAATGGTAA GGTTAGCAAA TACGATTCAA AGACCAATAA ATTATTTAAA
TACGTTAACG ATCTTATGAT CAAAGCGGTT CAGGGAAATG TGCTGGACAG CAAAGAATTT
TCTATTGCAT TCAAAGAGAA CAGCAAATTT TTTCTGATGG AGATGACACC GATTGATGTA
ACAATGAAAC AGTATGTTAC AAAGGTGAAT GTGTACGTGA ATAAAACGGA TTATGGAGTA
ATGAAAGTTG AAATGACCGA AAAGTCGGGC GACTATACAC TAATCACGTT TGTAAACCGG
GTATATAATG TTGCGTTGAA AGATGAAGAA TTCCTGGTTC AGTAA
 
Protein sequence
MNSFRKYIGI AVFVLLCCSM AGQTDPYVAM KDVAGFKTKL NQKNTSITSM TCDFVQEKSL 
SFMAQKVISK GNMKYKKPDM MKLEYTTPFV YIMSLYKGKV LIKDNGKVSK YDSKTNKLFK
YVNDLMIKAV QGNVLDSKEF SIAFKENSKF FLMEMTPIDV TMKQYVTKVN VYVNKTDYGV
MKVEMTEKSG DYTLITFVNR VYNVALKDEE FLVQ