Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_2112 |
Symbol | |
ID | 4186318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2459279 |
End bp | 2459923 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638072112 |
Product | hypothetical protein |
Protein accession | YP_678717 |
Protein GI | 110638508 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.769057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTT TCAGAAAATA TATTGGTATT GCCGTTTTTG TACTGCTGTG CTGTTCCATG GCCGGACAAA CTGATCCATA TGTGGCAATG AAAGATGTGG CTGGCTTCAA AACAAAACTT AACCAGAAAA ATACATCAAT CACTTCCATG ACCTGTGATT TTGTACAGGA AAAGAGTTTG TCTTTTATGG CTCAGAAAGT GATCTCTAAA GGGAACATGA AATATAAAAA GCCGGATATG ATGAAGCTGG AATATACAAC GCCCTTTGTC TATATCATGT CTTTGTATAA AGGTAAAGTA CTGATTAAAG ACAATGGTAA GGTTAGCAAA TACGATTCAA AGACCAATAA ATTATTTAAA TACGTTAACG ATCTTATGAT CAAAGCGGTT CAGGGAAATG TGCTGGACAG CAAAGAATTT TCTATTGCAT TCAAAGAGAA CAGCAAATTT TTTCTGATGG AGATGACACC GATTGATGTA ACAATGAAAC AGTATGTTAC AAAGGTGAAT GTGTACGTGA ATAAAACGGA TTATGGAGTA ATGAAAGTTG AAATGACCGA AAAGTCGGGC GACTATACAC TAATCACGTT TGTAAACCGG GTATATAATG TTGCGTTGAA AGATGAAGAA TTCCTGGTTC AGTAA
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Protein sequence | MNSFRKYIGI AVFVLLCCSM AGQTDPYVAM KDVAGFKTKL NQKNTSITSM TCDFVQEKSL SFMAQKVISK GNMKYKKPDM MKLEYTTPFV YIMSLYKGKV LIKDNGKVSK YDSKTNKLFK YVNDLMIKAV QGNVLDSKEF SIAFKENSKF FLMEMTPIDV TMKQYVTKVN VYVNKTDYGV MKVEMTEKSG DYTLITFVNR VYNVALKDEE FLVQ
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