| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2055 |
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| Symbol | |
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| ID | 4186716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2403848 |
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| End bp | 2405545 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638072055 |
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| Product | leucine-rich protein |
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| Protein accession | YP_678660 |
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| Protein GI | 110638451 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.805099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.572158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAAAA AAATAACCTG TTACACGGTT CTGTATATCT TTATCCTGTT GAATCAACCG
ATACAGGCGC AAACGTATGT AATACCGGAT GCGAATTTCA AAAATTACCT TGCATTAAAT
ATTCCTTATG TTTTAAATTC AAATCAGGAA TTAATTATCA GTAATGCGAA AATTTTTACA
GGAACAATAA ACTGTGTTGG TATGAATATC GAGGACCTCT CGGGGCTTCA GTATTTTTAC
AAACTCACTC AGCTAAATTG TAACAGTAAT CAATTAACGT TCCTGCCCTC GCTTGATAGC
CTAAAACAAC TACAGCACAT GTGGGTATAT AACAATAAGC TTACCAGCAT ACCCAGTGTA
AACCAGCTTA CGAATCTGCA AACACTTAAT GTTAAAAATA ATCAGCTTAC AAACCTTCCA
TCACTAACAG GCATGACAGC ATTAAAAAGC CTGGATTGCA GCAGCAACAA ATTAACAGCG
CTGCCGGACC TGAGTACCTT GTTAAATCTG GAGGAAATGT ATTGTTACAT CAATTTCATT
ACAAACATCC CATCTGTTTC AAACCTGCTT CATTTAAAAA TATTCAATAT CGAAAATAAT
GCAATTGCGC TATTGCCGGA TATTTCTCAA AATACCAAAC TCGAAATATT ACAGTTTGAT
TTAAACCAGA TTGAGACAAT TCCTCCGCTT ACTACATTAA CTGCTTTAAA ACAATTGATC
TTTGCACACA ACAAGATCTC AACGCTGCCA GATCTATCTG CTAATACAGC GCTCTTTATT
ATTACCGGAG ATAATAATCA ACTAACGCAC ATACCAGATT TATCCGGATT TGATAATCTT
ACACACGTAG AACTATCACA CAATCAATTA ACCTTTGAAG ATATCCTTCC TTCTTCCAAG
CATCCTCAAT TCAGTACAGT CTTTAACATT CAGCCGCAAG ATTCATTAAA TGTAAACCAG
CCAGTATCTG CTGTTAAAGG AAGTACTATA ACATTGCCGT TACAGTTTGA TCTTGCTGTT
TCAGGAAGCA CCTACAACTG GTATAAAAAT AATATCTACC TCAGCAGTAC AACGATACCT
GTATTAACCT TATCGAATAT TACAGAAATG AATGCGGGGC GCTACACGTG TATAATTACA
AACAATACAT CCAGGTTGAC AGGTATAACC TTGCATGCAA GATCTTATAG TATTTTAGTA
GAACCTTGCA TTAAATTCTC TTACATCAAT TACGAAATAA CTGCTAATGA TTGTTCAAAA
GGCGCTGCCA TACAAATTGA TCATACACAA ATCAGCGCGC TCAATACTCC TCTAACCTAT
GCGTTACACC CGCTAAACAA TCAATCGTCA ATAACGTCTG CCTCTGCAGT ATTGAATGAT
GTAATGCCGG GACGGTATTC ACTTACAATA AGCGATGTAA ATAATTGTTC CGTTGAACTG
CAAAATTATA TTTTCATTCC TGTACCTGCA GGATGTATGG ATAGTTTTAC ACCAAATGGA
GATGGGTTAG AAGATACCTA TCTTATAGAT AAACCAGGTT ATACAAAAAT TTATAATAAA
AACGGAACAT TGATCCGTAC ATTAAACACG CCGGCTGCCT GGGATGGCTC AGACGAGTCC
GGTAAATTAT GCCCGATGGG TTATTATATA ATTATCATCG ATGGCAAAGA AAAAACAGGC
GTTGTATTAA TTAACTAG
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| Protein sequence | MLKKITCYTV LYIFILLNQP IQAQTYVIPD ANFKNYLALN IPYVLNSNQE LIISNAKIFT
GTINCVGMNI EDLSGLQYFY KLTQLNCNSN QLTFLPSLDS LKQLQHMWVY NNKLTSIPSV
NQLTNLQTLN VKNNQLTNLP SLTGMTALKS LDCSSNKLTA LPDLSTLLNL EEMYCYINFI
TNIPSVSNLL HLKIFNIENN AIALLPDISQ NTKLEILQFD LNQIETIPPL TTLTALKQLI
FAHNKISTLP DLSANTALFI ITGDNNQLTH IPDLSGFDNL THVELSHNQL TFEDILPSSK
HPQFSTVFNI QPQDSLNVNQ PVSAVKGSTI TLPLQFDLAV SGSTYNWYKN NIYLSSTTIP
VLTLSNITEM NAGRYTCIIT NNTSRLTGIT LHARSYSILV EPCIKFSYIN YEITANDCSK
GAAIQIDHTQ ISALNTPLTY ALHPLNNQSS ITSASAVLND VMPGRYSLTI SDVNNCSVEL
QNYIFIPVPA GCMDSFTPNG DGLEDTYLID KPGYTKIYNK NGTLIRTLNT PAAWDGSDES
GKLCPMGYYI IIIDGKEKTG VVLIN
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