| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2053 |
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| Symbol | |
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| ID | 4186714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2402122 |
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| End bp | 2402694 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638072053 |
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| Product | RNA polymerase ECF-type sigma factor |
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| Protein accession | YP_678658 |
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| Protein GI | 110638449 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAAATTCA GCACACCTGA AATAATTTAT AAGATAAAAA CAGCCCAGGA CAAACAAGTC
TTAAACTGGC TGTACGATAC CGTTTACCCG AAAGTACGAA GGTATGTACT GGGTAATAAC
GGTTCCGTGG ATGATAGCAA GGACGTATTT CAGGAAGCTG TGCTTGTGCT ATACAAACAG
GTGATCGATA ATAAATATGA TCTGGTGAAA GACACCGAAG GATATGTGAT AACAATATCC
AGAAATATCT GGATCAATAC CTGTCGTAAA ACAAACAGAC AGCTAAATAT TGAGCTGGCA
GGCAATCCCG TTCAGGCTGA AGACAATGCA TTGATCAAGC TCATTATGAC AGAAAAATGG
GATGCCTTCC AGCGCCTGTT TGATATGATC GGAGATCGTT GTAAACAGCT GTTATTATAT
TCTACTTATG AAAAAATTTC CATGGAAGAG ATTGCTGTAA AAATGAATTT TACCAATGCC
AATGCAGCAA AGACAACCAA TTACCGGTGC AAGCAAAAGT TAATCGAATT GGTTGCTTCC
AACAAAGACC TTGCTAATTC GTTACACCCA TGA
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| Protein sequence | MKFSTPEIIY KIKTAQDKQV LNWLYDTVYP KVRRYVLGNN GSVDDSKDVF QEAVLVLYKQ
VIDNKYDLVK DTEGYVITIS RNIWINTCRK TNRQLNIELA GNPVQAEDNA LIKLIMTEKW
DAFQRLFDMI GDRCKQLLLY STYEKISMEE IAVKMNFTNA NAAKTTNYRC KQKLIELVAS
NKDLANSLHP
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