| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_2046 |
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| Symbol | |
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| ID | 4186707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2392613 |
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| End bp | 2393185 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638072046 |
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| Product | RNA polymerase specialized sigma subunit |
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| Protein accession | YP_678651 |
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| Protein GI | 110638442 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.53065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGATA ATTCAAAAAT CATTATTGAA TGCATCCGTA CAGGAAAAAA TAATGAGGCG
TTAAAATATT TATACAAAGA CCCGCTCAGA AAAATACGAA AGTTTATTTT GATGAATTCA
GGTACGTTGG ATGATGCCGA TGATGTCTTT CAGGATGCGA TCATTGTTTT ATTTCAATAC
GTTAAAAATG GAAAATACAA TGAAGAATAT GATCTGGATG GATTTTTGTT CCGGGTTGCT
AAAAACTCAT GGATTGACAT TGCACGAAAA AAACAAAAAG TAATTAAAGC ATCTTTTATT
GGTTTTGATA TTAGTGATGA AACAGACCAT TTAAATGATT TGATCAAAGA CGAACAATTA
AATACGTTTC ATTTTCTGTT TAATAAACTG GAAGATAACT GTAAAAAGAT ATTATCTTTC
GTTGTATTTG ATAAAAAAAG CATGAAGGAA ATTGCAGAAC TCATGGGATT TAAAGATGAG
AAGGTTGCTA AAAATCAACA TTACCGCTGC AAAAAATATT TTACAAAAAT AGTTTCTGAT
AATAAAGAAG CATTAACCTT TTTAAAGAAT TGA
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| Protein sequence | MKDNSKIIIE CIRTGKNNEA LKYLYKDPLR KIRKFILMNS GTLDDADDVF QDAIIVLFQY
VKNGKYNEEY DLDGFLFRVA KNSWIDIARK KQKVIKASFI GFDISDETDH LNDLIKDEQL
NTFHFLFNKL EDNCKKILSF VVFDKKSMKE IAELMGFKDE KVAKNQHYRC KKYFTKIVSD
NKEALTFLKN
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