Gene CHU_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_2023 
Symbol 
ID4184548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2356175 
End bp2357326 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content36% 
IMG OID638072026 
Productglycosyltransferase 
Protein accessionYP_678631 
Protein GI110638422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAATT TTTTAGTTAT TTTTAAGAAT ATGATGAAAC ACAGAATTTT ACTGGGTTCG 
GTCTTAAAGC CAACAAATGA TTCCCGAATG TACGAAAAAA TCGGGGAAAG TCTGAGCGTT
TTACCAAATT CAGAAATTCA TGTTGCCGGA TATAAAAGTG AACAGAACGA CCTGAAAAAT
ATCCGGTTTT ATCCAATTTT TTCCTCCGCG CGCCTATCCG TTTTACGGTT TATTGCACCT
TGGAAATTTC TCTTTTTAGC AGTTAAAGTA AAACCTCATA CCATCATATG TTCAACACAT
GAATTACTGC TAGTTACCTG TTTATACAAA ATATTATTTG GTTGTAAATT TATTTACGAT
GTACAAGAAA ATTACTTTTA TAATATCCTC TATACCGACA CATTCCCGTC TTTTTTAAAG
CCTGTTCTTG CTCATTGGGT GAAGCTAAAA GAAACCGTGT GTAAAAAGCA ATTAGACGGC
TATTTATTAG CAGAAAAAAC ATATCAACAG GAACTCAACG GACGTATTCA TGAACCTGCT
CTTGTACTTG AAAACAAGTA TCAGGGTGCT TGTCCGAACA AATTGGAAAT AGTAAAAATC
ACAGAAGGAA ATAAAATCCG GCTGTTGTAT TCCGGAACAA TTGACACTTC TTACGGAGTT
TTTGAAGCAA TTGATTTAAT TATACGGCTT TACTTACTTG ACTTCCGGTT TGAATTAACC
ATCATTGGTT TTGCCCCCAA TAACCGTGAA CTTACTAAAG TCAAAAACCG CATCGCTCCC
TACCCGTTCA TCAAGCTTAT CGGGGGCGAT AAACCTGTAC CACACCCTGA CATTTTATCA
GCTATCAAGA CCCACGACTT CGGATTACTC CCGTACCGTT TTAATGAAAG TACAACCCTT
CGGGTACCTA CCAAACTGTT TGAGTATTTA CTGAATCATC TTCCGGTTAT CAGTTCACAC
AATAAAACAT GGGAGGAATA CATCAAAAAA TTCAATGCCG GTATCATTAT TCCTTTTTCA
GATCTTCCTA AAGCAACGAT CATAAAAGAA CAGATTTTAA ATACAGAGTT TTATACCCAG
GGCAACCCGG CCGAATTGAT CTGGGAAGAA TCAAAATTAT TGAACTGGTA CAGCGAACAC
TTTTTAAACT AA
 
Protein sequence
MYNFLVIFKN MMKHRILLGS VLKPTNDSRM YEKIGESLSV LPNSEIHVAG YKSEQNDLKN 
IRFYPIFSSA RLSVLRFIAP WKFLFLAVKV KPHTIICSTH ELLLVTCLYK ILFGCKFIYD
VQENYFYNIL YTDTFPSFLK PVLAHWVKLK ETVCKKQLDG YLLAEKTYQQ ELNGRIHEPA
LVLENKYQGA CPNKLEIVKI TEGNKIRLLY SGTIDTSYGV FEAIDLIIRL YLLDFRFELT
IIGFAPNNRE LTKVKNRIAP YPFIKLIGGD KPVPHPDILS AIKTHDFGLL PYRFNESTTL
RVPTKLFEYL LNHLPVISSH NKTWEEYIKK FNAGIIIPFS DLPKATIIKE QILNTEFYTQ
GNPAELIWEE SKLLNWYSEH FLN