Gene CHU_2005 details

Gene Information

• Locus tag: CHU_2005
• Symbol: apt
• ID: 4187106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 2340982
• End bp: 2341527
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638072008
• Product: adenine phosphoribosyltransferase
• Protein accession: YP_678613
• Protein GI: 110638404
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00122085
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTACAT CCGAAGAAAT TTTAGAACAG ACAATAAAAT CAACCATTCG CGACATTGTT 
GATTTTCCTG AACCGGGTAT TATTTTTAAG GACATTACTC CATTATTAAA AGACCCGCAA 
TTATGTAAAG CAATCGTTCA ATCTATTACT GATCAATTAC GGCCGTTACA GCCGGATGCA 
CTGGCTTGTC TGGACAGCAG AGGCTTCTGG TTCGGGTTAT CCATTGCCAT GGAATTGGGT 
ATACCGATGA TACCAATCCG TAAAAAAGGA AAACTGCCTT ATGAAACCGT ATACGAAGAA 
TATGCCTTGG AATATGGGAC CAATACAATT GAAATGCATA CAGACGCTGT TCAGCCCGGA 
TGCCGGGTAG CTATTCACGA TGATATTTTA GCTACCGGCG GCACAGCAGA GGCTACATCT 
AAGCTGATCA AAAAAGCGAA GGGTGAAATT ATTGCTTACT CATTTTTAAT TGAACTGGAC 
TTTCTCAAAG GCAAAGATAA ACTGGCCCCT TACTGTACAA CCATTCAATC GCTGATCAAC 
TATTGA 

 

Protein sequence

MATSEEILEQ TIKSTIRDIV DFPEPGIIFK DITPLLKDPQ LCKAIVQSIT DQLRPLQPDA 
LACLDSRGFW FGLSIAMELG IPMIPIRKKG KLPYETVYEE YALEYGTNTI EMHTDAVQPG 
CRVAIHDDIL ATGGTAEATS KLIKKAKGEI IAYSFLIELD FLKGKDKLAP YCTTIQSLIN 
Y