| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1986 |
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| Symbol | kdpD |
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| ID | 4186077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2318793 |
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| End bp | 2319917 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071989 |
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| Product | sensor kinase for the kdp operon |
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| Protein accession | YP_678594 |
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| Protein GI | 110638385 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.169225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA AAGATAAAAC CGTTCAGCAC TTTCTGGATC TGATCAAAAA ATCCAGAAAA
GGTAAATTTA AAATCTACAT CGGCATGAGT GCCGGTGTAG GTAAATCATA CCGTATGCTG
CAGGAAGCAC ATGCCTTACT GAAAAATGGT ATTGATGTAA AGATCGGTTT TATCGAAACG
CACAATCGCA AAGAAACACA TGCGTTGTTG GAAGGTTTAC CTGTTGTACC CAGACGCAAA
TTATTTTACA AGGGTAAAGA ATTAGAAGAA ATGGATGTGC AGGCCATTAT TAATTTACGT
CCTGAGGTTG TAATTGTAGA TGAACTTGCG CATACCAATA TTGAAGGAAG TAAAAATGAA
AAACGCTGGC AGGATGTGAT CGAAATTTTA GAAGCCGGTA TCAACGTCAT TTCGGCCGTA
AACATTCAGC ACATTGAAAG CCTGAATGAA GAAGTAAAAA CAATCACGGG TGTTGAAGTA
AAAGAACGCA TCCCCGATAG TATCTTAACC CAAGCCGATG AAGTTGTAAA TATTGATCTT
ACAGCCGACG AATTGATTAT CCGTTTAAAA GAAGGGAAAA TATATCAGGA AGAAAAAATA
CAGGCTGCCT TACAGAATTT CTTTAAAAGC GATCATATTT TGCAACTCCG TGAATTAGCA
CTCAAAGAAG TAGCTTCTCA AGTAGAACGG AAAGTTGAAA CCGAAGTAAC GAAAACGCAT
GCCATTAAAC ACGAACGTTT TTTAGCGTGT ATCAGCAGCA ACGATCATGC AGCAAAAGAA
GTGATTCGAA AAACAGCACG ACTGGCAAAT TATTACCATA GCAAGTGGTA TGTGTTATAT
ATACAAACAC CGAATGAACA TGCAGATAAA ATAGCACTAG ATAAGCAACG CCATTTGATA
AATAATTTTA AATTAGCAAC CGAATTGGGT GCAGAAATTA TTAAGGTAGA AAGTGCTTCT
GTTACAAAAA TGATCGTAAG TCAAGCCATT GAAAGGAACA TCACTACTAT TTGTATTGGT
AAGCCTCGTT TAAATGTGTT CAAAATTATC TGGAGAACCA ACGTATTAAA TACGCTTTTC
AAAAAGTTAT CTTCTAACAA TATTGACCTT GTAATTCTAT CTTAA
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| Protein sequence | MSEKDKTVQH FLDLIKKSRK GKFKIYIGMS AGVGKSYRML QEAHALLKNG IDVKIGFIET
HNRKETHALL EGLPVVPRRK LFYKGKELEE MDVQAIINLR PEVVIVDELA HTNIEGSKNE
KRWQDVIEIL EAGINVISAV NIQHIESLNE EVKTITGVEV KERIPDSILT QADEVVNIDL
TADELIIRLK EGKIYQEEKI QAALQNFFKS DHILQLRELA LKEVASQVER KVETEVTKTH
AIKHERFLAC ISSNDHAAKE VIRKTARLAN YYHSKWYVLY IQTPNEHADK IALDKQRHLI
NNFKLATELG AEIIKVESAS VTKMIVSQAI ERNITTICIG KPRLNVFKII WRTNVLNTLF
KKLSSNNIDL VILS
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