Gene CHU_1984 details

Gene Information

• Locus tag: CHU_1984
• Symbol: kdpC
• ID: 4186075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cytophaga hutchinsonii ATCC 33406
• Kingdom: Bacteria
• Replicon accession: NC_008255
• Strand: +
• Start bp: 2317057
• End bp: 2317617
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638071987
• Product: potassium-transporting ATPase subunit C
• Protein accession: YP_678592
• Protein GI: 110638383
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2156] K+-transporting ATPase, c chain
• TIGRFAM ID: [TIGR00681] K+-transporting ATPase, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0143266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.913346
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAATCGA ATATACTTCC TTCCATAAAA TTAACACTTG TTTGTCTTGT TTTCTTTATG 
GGTATTTATA CACTTGCGGT ATACGGCATT GCACAATTCA CACCAAATAA TGGCAATGGT 
GACATGATTG TGCACAATGG AAAAATCTAT TACAGCAACA TCGGACAGGC GTTTACAGAC 
GACAGCTATT TCAACTCAAG ACCATCTGCA GTAGGCTATA ATGCAGCAGG TTCGGGTGGC 
AGTAACAAAG GTCCGGGTAA TCCGGACTAT TTAAAAGAAG TACAGGCACG CATTGATACC 
TTTCTGGTTC ATAATCCAGG TGTAAGCAAA TCAGAGATCC CATCGGATCT GGTAACAGCA 
AGCGGAAGCG GGTTAGATCC GAATATTTCT GTGCAAGCGG CAAAGGTGCA AATAAAACGT 
ATTGCTAACA TTCGTAATAT TGCAGAAGAA ACATTATTTC AATTAATCGA ACAACAAACT 
GAGAAACCAT TGTTGGGATT ATTCGGTACT GAAAAAATAA ATGTACTGAA ACTCAATATT 
GCTTTAGATG ATTTAAAATA A 

 

Protein sequence

MKSNILPSIK LTLVCLVFFM GIYTLAVYGI AQFTPNNGNG DMIVHNGKIY YSNIGQAFTD 
DSYFNSRPSA VGYNAAGSGG SNKGPGNPDY LKEVQARIDT FLVHNPGVSK SEIPSDLVTA 
SGSGLDPNIS VQAAKVQIKR IANIRNIAEE TLFQLIEQQT EKPLLGLFGT EKINVLKLNI 
ALDDLK