Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1980 |
Symbol | |
ID | 4186071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2310645 |
End bp | 2311322 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071983 |
Product | siderophore-interacting protein |
Protein accession | YP_678588 |
Protein GI | 110638379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2375] Siderophore-interacting protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.654541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.56438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGTTATTT CCAAAGAACA GATTGCAGAC AATGTGTTTC ACCTGATCAT TGCAGGGAAA GCGCTGCAGA ATCTGGCATA TATTCCCGGA CAACAGGTGC GTATCTTTAT TGGTATGGAC AAAAAACTGG GCTTAAGGGA AAAGATCCGT ACGTATTCGA TCTGGAATTA CCACAGTGGC AACGGCACTA TGAATCTAAC AATCTGTGCA CATTCAGGCG GGCCGGGCAG TAACTGGATA AAATCTGTAA AAGCGGGAGA AGAAATATAT CTTACCGCTC CACAAGGGAA TTTTTTACTG AATGTTCATG CATCTGAATA TCTATTCATT GGTGATGCGA CAACACTTGC ACACTTTTAT GCCATCAGGA GAAATCTGCC TGATACTAAA ATCATGCGTG GTATTATCTA TGCAGAAAAA AAATCACAAC TGTTTACCGA CCTGGATGGT TTACTTCCGT TTGAGTTTTA TGAATTGCCG CACAATCCGA TAGAGCAGAT AAAAGAACTC ATAGAACTCA AACCACCTGT AAATACTGCT GATGCGATTG TATATATCGG AGGCGATGGG CGTATATGTG TAGCGCTGAA TACCTACTTC AGAAAATTTA AAAGCTGGAA AACAAAAAAT ATCCGGATTA AACCATTCTG GATGCCTGGT AAGCAGGGAC TGGAGTAA
|
Protein sequence | MVISKEQIAD NVFHLIIAGK ALQNLAYIPG QQVRIFIGMD KKLGLREKIR TYSIWNYHSG NGTMNLTICA HSGGPGSNWI KSVKAGEEIY LTAPQGNFLL NVHASEYLFI GDATTLAHFY AIRRNLPDTK IMRGIIYAEK KSQLFTDLDG LLPFEFYELP HNPIEQIKEL IELKPPVNTA DAIVYIGGDG RICVALNTYF RKFKSWKTKN IRIKPFWMPG KQGLE
|
| |