Gene CHU_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1980 
Symbol 
ID4186071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2310645 
End bp2311322 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content41% 
IMG OID638071983 
Productsiderophore-interacting protein 
Protein accessionYP_678588 
Protein GI110638379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.654541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.56438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTATTT CCAAAGAACA GATTGCAGAC AATGTGTTTC ACCTGATCAT TGCAGGGAAA 
GCGCTGCAGA ATCTGGCATA TATTCCCGGA CAACAGGTGC GTATCTTTAT TGGTATGGAC
AAAAAACTGG GCTTAAGGGA AAAGATCCGT ACGTATTCGA TCTGGAATTA CCACAGTGGC
AACGGCACTA TGAATCTAAC AATCTGTGCA CATTCAGGCG GGCCGGGCAG TAACTGGATA
AAATCTGTAA AAGCGGGAGA AGAAATATAT CTTACCGCTC CACAAGGGAA TTTTTTACTG
AATGTTCATG CATCTGAATA TCTATTCATT GGTGATGCGA CAACACTTGC ACACTTTTAT
GCCATCAGGA GAAATCTGCC TGATACTAAA ATCATGCGTG GTATTATCTA TGCAGAAAAA
AAATCACAAC TGTTTACCGA CCTGGATGGT TTACTTCCGT TTGAGTTTTA TGAATTGCCG
CACAATCCGA TAGAGCAGAT AAAAGAACTC ATAGAACTCA AACCACCTGT AAATACTGCT
GATGCGATTG TATATATCGG AGGCGATGGG CGTATATGTG TAGCGCTGAA TACCTACTTC
AGAAAATTTA AAAGCTGGAA AACAAAAAAT ATCCGGATTA AACCATTCTG GATGCCTGGT
AAGCAGGGAC TGGAGTAA
 
Protein sequence
MVISKEQIAD NVFHLIIAGK ALQNLAYIPG QQVRIFIGMD KKLGLREKIR TYSIWNYHSG 
NGTMNLTICA HSGGPGSNWI KSVKAGEEIY LTAPQGNFLL NVHASEYLFI GDATTLAHFY
AIRRNLPDTK IMRGIIYAEK KSQLFTDLDG LLPFEFYELP HNPIEQIKEL IELKPPVNTA
DAIVYIGGDG RICVALNTYF RKFKSWKTKN IRIKPFWMPG KQGLE