| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1968 |
|---|
| Symbol | nrtB |
|---|
| ID | 4186991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2297745 |
|---|
| End bp | 2298878 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071971 |
|---|
| Product | nitrate ABC transporter, permease component |
|---|
| Protein accession | YP_678576 |
|---|
| Protein GI | 110638367 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.52047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.211755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGCA ACCTCTGTGT CCTGTCCACT GTCAACTGTC AACAAAACAT TATGAAAACC
AAACTGATTA CATCCATGAA CTGGATCGGC CTTGGCTTTT TAGAGCCGGT TATCCGATTG
TTAAGCGGAG AGGAACCGCT TAAAAATTTA ACAGAAGTAG GAAAGAATTT GTTTTTGCCG
CTGGCTTCTG TTTTAGCATT TATAGTATTG TGGGAAGCCG GAGCGCATAA GTTATACAGC
ATAGAAGCAG ATCGTAAGGT GCAGAAAGTC TTGACTGAGC AGGGAAAAGA TGCTGCCGTT
CAAATGCGGA AATGCATAGA TTCCGGAGAA AAAGAATGCA AGCCAAACTC ACTGCCTTCA
CCAAGTCAGG TGTATGCAGC CTGCTTATCT TTATTGGCCG ATCACAGAAT GATTGCACAG
GATAAAAAAT CATTTACCGA TAAAACGGCA AAGGTAAATG CCATGCGTGC AAAAGCAGGG
CAAAGTGAGA TACGTTATAC CGGTAGGCCT TCCTTCGTAG ATCAGATAGG CACAAGTTTA
AAGACGGTGT TTGCAGGTGT ATTGTTATCG ATGTTCATTG CTATTCCGAT TGGTATTTTA
TTGGGTTTAA GTGAAACACT GAGAACTTCA ATCAATTGGC TTATCCAGAT TTTAAAGCCC
GTATCGCCGG TCGTGTGGCT GTTATTGGTT TCAATGGTTA TTAAAACATT ACTGACAGAT
TCAACCATGG ATAAGTCGTT TCTTATTTCT TTTATAAGTG TCGGCTTATG CGGAATGTGG
GCTACACTTG TAAATACGAG TATGGGGGTG GCATCGGTAG ATAAAGATTA CATAAATGTT
TCTAAAGTAC TTCGCTTAAA TGTATGGAAG AATATTTATA AGATTGTGTT GCCTTCGTCT
TTCCCATTAA TATTCACAGG TATCCGTATT ACTGTTTCTG TTTCATGGAT GGTGTTGATC
GCTATTGAAC TGTTGGCGCA AAGTCCCGGC CTTGGCTCAT TTGTATGGGA ACAGTTTCAG
AACGGGGCGA ACGATTCAAA TGCAAAAATT CTGGTAGCCA TGTTTGTGAT TGGCGGCATT
GGCTTTTTAC TGGATAAAAT CATGATGACG CTACAGAAAT TATTAACGTT CTGA
|
|---|
| Protein sequence | MPGNLCVLST VNCQQNIMKT KLITSMNWIG LGFLEPVIRL LSGEEPLKNL TEVGKNLFLP
LASVLAFIVL WEAGAHKLYS IEADRKVQKV LTEQGKDAAV QMRKCIDSGE KECKPNSLPS
PSQVYAACLS LLADHRMIAQ DKKSFTDKTA KVNAMRAKAG QSEIRYTGRP SFVDQIGTSL
KTVFAGVLLS MFIAIPIGIL LGLSETLRTS INWLIQILKP VSPVVWLLLV SMVIKTLLTD
STMDKSFLIS FISVGLCGMW ATLVNTSMGV ASVDKDYINV SKVLRLNVWK NIYKIVLPSS
FPLIFTGIRI TVSVSWMVLI AIELLAQSPG LGSFVWEQFQ NGANDSNAKI LVAMFVIGGI
GFLLDKIMMT LQKLLTF
|
|---|
| |