Gene CHU_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1960 
Symbol 
ID4186983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2290173 
End bp2291123 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content37% 
IMG OID638071963 
Producthypothetical protein 
Protein accessionYP_678568 
Protein GI110638359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.190319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATTTAGTTTG CCTGGTTATT TTATTATCCA TTCAGCAAGG ATTTGCACAA 
ACAGAACCTA CAGGTGCGGA TACTACAATC ACAAATAATA CCTCTGTACT TGTCGGAGTC
GATACGCTGT GGCGTACTAC CGCAACATTT GGTATTAACT TTACAAATGT AGGCTTAAAT
AACTGGGCCG GCGGTGGGCA AAATGCACTG TCTTTTACCG GTGTATTTCT TGGTACAAAT
GAATACCACA AAGAACGCGT GCACTGGAGT AACCTTATTG ACATCGCATA TGGTTTTCAA
CGCCTGGGGT CTAATTCCTC TCCATTTAGA AAAAGTGATG ACCGTATTTA TGTACAAACA
AAATTTGCAT ACGAGCAGAC ACAAAAATTA CGCTATGCAG CACTAGTTGA TTTCAGATCC
CAATTCGCTG AAGGCTTTAA CTATTACGAT GATGTTAAAA AAGATTCAGC AGTAAAGATA
TCAAACTTCC TGGCACCGGC TTATGTTACG GGATCATTGG GTATTGAATA CCTGCCATTT
AAAAGTACAA GTATACTTTT CTCACCTGTA TCAGCTAAGT ATACCATTGT GAATGACCGC
ACACTTTCAG ACAGCGGTGC ATATGGTGTT GAAAGAGGCA AAATAATAAG AAAAGAATAT
GGGGTTTCAT TCATGCTTAA ATACAAAGCT GATATCATGA AGAATGTAAC ATTTGCAACG
CAGCTGTATT TATTTGACAA TTACAAGAAT TTAAATGTGG ATGTGTTCTG GGATTGCTTC
TTATACCTGA AAGTTAATAA ATTCTTAACA ACAACATTTA CAACGAGTCT TATTTACGAC
GATGATATAA ATATAACACG TGATAATGGC TCTGTAGGAC CGGCGATACA ATTCAAAAAT
GTGCTTGCTG TTGGATTATC TTATAGAATA AATGGCTACG GCATTCGTTA A
 
Protein sequence
MKKYLVCLVI LLSIQQGFAQ TEPTGADTTI TNNTSVLVGV DTLWRTTATF GINFTNVGLN 
NWAGGGQNAL SFTGVFLGTN EYHKERVHWS NLIDIAYGFQ RLGSNSSPFR KSDDRIYVQT
KFAYEQTQKL RYAALVDFRS QFAEGFNYYD DVKKDSAVKI SNFLAPAYVT GSLGIEYLPF
KSTSILFSPV SAKYTIVNDR TLSDSGAYGV ERGKIIRKEY GVSFMLKYKA DIMKNVTFAT
QLYLFDNYKN LNVDVFWDCF LYLKVNKFLT TTFTTSLIYD DDINITRDNG SVGPAIQFKN
VLAVGLSYRI NGYGIR