| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1926 |
|---|
| Symbol | ribE |
|---|
| ID | 4184275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2256715 |
|---|
| End bp | 2257302 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071928 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_678534 |
|---|
| Protein GI | 110638325 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.285487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAG GAATTATAGA AAGCTTAGGT GTTATTGAGA AGATTGTTGA AGAGCGGGGC
AACCTGCATT TCACAGTACG TTCATCTATC TCGCATGAAC TGAAGATTGA TCAGAGCCTT
TCGCATAACG GAATCTGCTT AACGGTAATT GCATTAGATG ACGATACGCA TACGGTTACA
GCTATTCAGG AAACGATCCG TAAAACAAGT ATTTCTGAAT GGAAAGAACG TATGCATGTG
AATTTAGAAC GTGCAATGCC TGCGCACGGC CGATTTGACG GGCATATTGT GCAGGGCCAT
GTAGATCAGG TTGCCACATG TATAAAACGT AAAGATGAGA ACGGCAGCTG GCTGTTTACC
TTTCAGTATG ATGCTTCCTT AGGAAATGTA ACCGTTGAGA AAGGTTCTAT CTGTGTGAAC
GGTATAAGTC TTACGGTAGT AGATTCGCAA AACGATTCTT TTTCCGTAGC AATCATCCCA
TATACCTTTG AACATACGTC TTTAAAAGAA TGTGTTGTTG GTTCGAAGGT TAATATTGAA
TTTGATATTT TAGGAAAGTA CGCTGCGAAG TTGCTGGGAA GGAAGTAA
|
|---|
| Protein sequence | MFTGIIESLG VIEKIVEERG NLHFTVRSSI SHELKIDQSL SHNGICLTVI ALDDDTHTVT
AIQETIRKTS ISEWKERMHV NLERAMPAHG RFDGHIVQGH VDQVATCIKR KDENGSWLFT
FQYDASLGNV TVEKGSICVN GISLTVVDSQ NDSFSVAIIP YTFEHTSLKE CVVGSKVNIE
FDILGKYAAK LLGRK
|
|---|
| |