Gene CHU_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1875 
Symbolglk 
ID4184459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2194126 
End bp2195034 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content42% 
IMG OID638071873 
Productglucokinase 
Protein accessionYP_678483 
Protein GI110638274 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.173781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00131381 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTTAG GAATTGACGT AGGTGGAACT TCGGTAAAAT TTGGTTTGGT TACTCCTGAA 
GGAGAAATAC AAAACGCTAC ACGTTTTATG ACGGCCGACT GGGTAAACGG TATTGGTTTT
GTTGAATCGA TGAAGCTGGA AATAGGAAAT TTTTTGAAAC AATACCCAAT AGTAAAAGGT
GTTGGAATCG GCTGGCCGGG TTTAGTTTCT CTGGACCGCA CTAAAGTTAT CCTGCTACCG
AATATCCCTT CTGTGGTAAA TGTGCCTATT GTTGAGATCC TGCGTTCAGA ATTTCCGCAT
ATCCATTTTA AAATTGAAAA CGATGCGAAA TGCGCTGCAT TGGGTGAATA TTATTTTGGA
GAAAACAAAC GCATGCAGAC CTTTATTCTA CTTGCGTTGG GTACAGGAGT TGGTTCCGGT
GTTATGATGA ACGGCAAGCT GTTTATCGGC GGCCGTGGTA ATGGTACAGA AGTGGGGCAC
ATGCTTACAA CAAGAGGCAA GTCATTGGAA AATCAGGTTG GGATCAATCA TCTGATCGCC
TACACACATG AACAGCTGGC ATTAGATGTA GCAAAGAAAA GCAGCTTACA TACAATAGCT
GAATTATCTC CGAAAGTAAT TGCAGATCAT GCTGCTCAGG GCGATGCTTT GGCATTGGCT
GTATGGGCAG ATATCGGTAC AATTATCGGT GAAAGTCTTG TGAATATTGT ACGAGTAATG
GATCTGAATA ATATTTTATT AGGCGGCGGT ATTTCAGGAG CCTTTGATTA TTTCGTTCCG
AATCTGAAGA AAGCAATGCT GGAACATTTG CCAACATACT ATACAGATGA TATGTACATC
GGTAAAGCTA CGCTAGAGAA CGATGCAGGC CTGCTGGGTG CTGCCGGACT GATCATGGAA
GCGATATAA
 
Protein sequence
MILGIDVGGT SVKFGLVTPE GEIQNATRFM TADWVNGIGF VESMKLEIGN FLKQYPIVKG 
VGIGWPGLVS LDRTKVILLP NIPSVVNVPI VEILRSEFPH IHFKIENDAK CAALGEYYFG
ENKRMQTFIL LALGTGVGSG VMMNGKLFIG GRGNGTEVGH MLTTRGKSLE NQVGINHLIA
YTHEQLALDV AKKSSLHTIA ELSPKVIADH AAQGDALALA VWADIGTIIG ESLVNIVRVM
DLNNILLGGG ISGAFDYFVP NLKKAMLEHL PTYYTDDMYI GKATLENDAG LLGAAGLIME
AI