| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1864 |
|---|
| Symbol | |
|---|
| ID | 4184448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 2185349 |
|---|
| End bp | 2186047 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638071862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_678472 |
|---|
| Protein GI | 110638263 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00030061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGTC GTTTTTCAAT AGCAAAAAGT AAAGAAGAAA TCGCAAAGCG TTTCAATGTT
GGTGCACCGG CTAATTTTAA GCCCAGGTAT AACGTTGCCC CTTTGCAGCA ATTGCCCGTT
ATCACGAGCA AAAAACCAAA TGAGATCAGT TTCATGCGTT GGGGCCTGGT GCCAAGCTGG
TCGCTTGATG CATCAACCGC TGCAAACATG ATTAATGCAC GCGGTGAAAC CATAACATCA
AAAATTCCTT TCAAACATTG TGTAAAAGAT CAGCGCTGCC TGATACCGGC AGATGGTTTT
TATGAATGGA AAAAAGAAGG CAAAGCAAAA ATACCGTTCC GTTTTACCTT AAGCAACGAA
GATCTATTCT GCTTTGCAGG CTTATGGGAT TCGTGGGAAA ACCAGGAAAC AGGTGATATT
TTAAATACCG TAACAATCAT TACAACGGAA GCCAATAAAC TGGTAAGCGA TGTACATGAG
CGCATGCCGG TGATCCTGCG TAAAGATCTG GAACGTTTAT GGATCTCTGA AAGCATTACA
GACAGCCAGA TCAGCAGTCT GCTTAAACCA TATGAAGCAC AATCGATGGC TTCATACAAG
GCACATAAAT CGGTGAACGC GGCATCAAAC GATACACCCG AGTGTATTCA GCCTGCACCT
AAGATCTATC CGGGAGAATC CTTCTCTCTA TTCGACTAA
|
|---|
| Protein sequence | MCGRFSIAKS KEEIAKRFNV GAPANFKPRY NVAPLQQLPV ITSKKPNEIS FMRWGLVPSW
SLDASTAANM INARGETITS KIPFKHCVKD QRCLIPADGF YEWKKEGKAK IPFRFTLSNE
DLFCFAGLWD SWENQETGDI LNTVTIITTE ANKLVSDVHE RMPVILRKDL ERLWISESIT
DSQISSLLKP YEAQSMASYK AHKSVNAASN DTPECIQPAP KIYPGESFSL FD
|
|---|
| |