| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1815 |
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| Symbol | sufS |
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| ID | 4185041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 2130601 |
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| End bp | 2132598 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638071814 |
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| Product | selenocysteine lyase |
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| Protein accession | YP_678424 |
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| Protein GI | 110638215 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.653401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGATGC CATTGCAGTG CTTGAAGACG TTGATATCAC GAACTACCAT GAGTACAAAT
ATTAATTCAA ACAACTTACC AGACGTAAGT TCACTTGAAA AGCTAGCAAA TGAATTGTTC
TTAGCTCTGC CCGGAAATTT TCCGAATCCG GAATCTTTGC GTGAGAAGCT GAACAGTTCA
TCCGGCAGCG ATGCAGCATT TGGTCAGACT GAACGATTCA ATCTAAAAGA TCCTCAAACA
TCTTTTCAGA ATCCGCATAG CTATGAACCA CAGCAGGCAT TGCCTTCAGG AAGCGGTCTG
GGTATCTCTC CTTCTGTGCT ACAGCATACC AATACAATTG ATGTGCAGGC ATTGCAGAAT
TTAATTCCCG GTGAATCGTA CAAAGGAGGC ATTACGCCTT ATTCTCCGAC CGACCAAGGA
AATGCTGTAA ATGCTTCGGA TCCGCAAACC AGTTTTGCTG AGCCTAAACA TGAAAGCCGC
GGTATTCCCA CTTCCCTTTC CGGAAGCGGT ATTTCCCCAT CTGCCTTACA GCATGGCCAG
AAGCCGGATA AGCTTCCGAC TGTACATGAA CAGGCGTATG GAAACGATCT TACAAGCATA
CTTACATCTA TTAATACGTT TGAGCTAAGT CCGCAGCTAC CACTCGTAAA CGATTCTTCT
TTTTATTTTC TTTCTGAAAC CAGGAATTAC GGATCGAATA CAAAAGTAAA TCAACAGCAG
CACACTTCTG TTAAAGAAGT ACATACTCCA GGCGGTATTC TGTCAAAACC ATTTGATGTT
AATCTGATAA AAAAGGATTT TCCGATTTTA CAGGAACGTG TAAACGGGCG ACCGTTGATC
TGGCTGGACA ATGCAGCAAC CACGCAGAAA CCCAAACAGG TAATTGACCG GATCAGCTAT
TTCTATGAGC ATGAAAATTC GAACATTCAC CGTGCAGCGC ATGAGCTGGC TGCACGTGCA
ACGGATGCCT ATGAAAGTGC CCGTCAGAAA GTACAAACGT TCATCAATGC CGGTTCAATT
AATGAAATCA TATTTGTGCG TGGTGCAACA GAAGCAATCA ACCTGATCGC AAAAAGCTGG
GGCGAACAGA ATCTGCAGGC CGGAGATGAA ATCATTGTAA GCCATCTGGA ACACCACGCG
AACATTGTTC CGTGGCAGCA GCTGGCGGCA AAGAAAGGTT TAAAGCTACG TGTCATTCCG
GTGGATGATG ACGGACAGAT CATACTTGAA GAATACGCCA AACTGCTGGG GCCAAAAACA
AAACTTGTTT CTTTCACCCA GGTATCAAAT GCATTGGGCA CTGTAACGCC TGCAAAAAAA
ATCGTTGAGC TGGCACATCA GGCCGGTGCA AAAGTTTTGG TAGATGGGGC CCAATCCATT
TCCCACATGC GTGTAGATGT GCGTAACCTG AATTGTGACT GGTTTGTATT TTCCGGACAC
AAAGTATTCG GACCAACAGG TATTGGTGTT GTATATGGAA AAGAAGATCT GCTGAATGAA
ACGAATCCAT GGCAAGGCGG CGGTAATATG ATTGTTGATG TAACATTCGA ACATACTACC
TATCACAAAG CACCGGGGCG GTTTGAAGCC GGTACGGGAA ACATTGCAGA TGCTGTAGGC
TTGGGAGCCG CGCTTGATTA CGTAAGCAGA CTTGGCATTG ATGTGATCAA TCAATACGAA
CATTATCTAC TCGTGTATGC TACAAAATTA TTGAAAGATA TTCCGGGTTT ACGCCTGATC
GGTACGGCCG AAGACAAAGC ATCGGTATTA TCGTTTGTGT TTGATGGCTA TAAAACAGAA
GAAGTTGGTG CAGCGCTTAA CCAGGAAGGC ATTGCAGTAC GTTCCGGGCA TCATTGTGCG
CAGCCTATCT TAAGACGCTT CGGACTGGAA GCAACCGTTC GCCCATCGCT GGCCTTCTAC
AATACATGTT CGGATATTGA TGTGCTTGTT GAAACGCTTT ACCGTTTACG CAGCGGACAT
AAACGTGCCA TAAGATAA
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| Protein sequence | MTMPLQCLKT LISRTTMSTN INSNNLPDVS SLEKLANELF LALPGNFPNP ESLREKLNSS
SGSDAAFGQT ERFNLKDPQT SFQNPHSYEP QQALPSGSGL GISPSVLQHT NTIDVQALQN
LIPGESYKGG ITPYSPTDQG NAVNASDPQT SFAEPKHESR GIPTSLSGSG ISPSALQHGQ
KPDKLPTVHE QAYGNDLTSI LTSINTFELS PQLPLVNDSS FYFLSETRNY GSNTKVNQQQ
HTSVKEVHTP GGILSKPFDV NLIKKDFPIL QERVNGRPLI WLDNAATTQK PKQVIDRISY
FYEHENSNIH RAAHELAARA TDAYESARQK VQTFINAGSI NEIIFVRGAT EAINLIAKSW
GEQNLQAGDE IIVSHLEHHA NIVPWQQLAA KKGLKLRVIP VDDDGQIILE EYAKLLGPKT
KLVSFTQVSN ALGTVTPAKK IVELAHQAGA KVLVDGAQSI SHMRVDVRNL NCDWFVFSGH
KVFGPTGIGV VYGKEDLLNE TNPWQGGGNM IVDVTFEHTT YHKAPGRFEA GTGNIADAVG
LGAALDYVSR LGIDVINQYE HYLLVYATKL LKDIPGLRLI GTAEDKASVL SFVFDGYKTE
EVGAALNQEG IAVRSGHHCA QPILRRFGLE ATVRPSLAFY NTCSDIDVLV ETLYRLRSGH
KRAIR
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