Gene CHU_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1806 
Symbol 
ID4185032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2120340 
End bp2121086 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content36% 
IMG OID638071805 
Producthypothetical protein 
Protein accessionYP_678415 
Protein GI110638206 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0177003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.791252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAT CTACAATCGC TCAAAAATTA GATGCTTTAG TCAAGCTTCA ATCAATCGAC 
TCAAAATTAG ATGAAATCAT CAAAGTAAGA GGAGACCTTC CTGAAGAAGT AAGAGACCTG
GAAGATGAAT TAGCTGGCTA TGAGACCCGT TTAACCAAGC ATGAAGGTGA AATTAATACG
TTAGAAGAAA GTATTAAAAA CTTCAAAAAC GGAATTAAAG AATCCGAAAA ACTTATAAAG
AAATACGAAG AGCAGCAAAA AAACGTGCGT AACAACCGTG AGTTTGATGC AATCAGTAAA
GAAGTAGAGT TACAGCAGTT AGAGATTCAG GTTTCTGAAA AAAGAATTAA AGAAGCATTG
CAGCAGATTG AATTCAAAAA AGAAGAAATC AAAAAAACGG ATTACAACTT AAGCGAACGT
AAAAAAGACC TTGAGAACAA GAAACAGGAA TTAGAAGTAA TCGTTTCTGA AAGTCAGGAT
GAAGAAGTTA AATTGAACAA AGAACGCGAA AAAGCTTCAA AGCAAATTGA AGAGCGTTTA
TTGAACTCAT ATACAAAATT AGTTAACAAT TACCGTAACG GACTTGCTGT AGTATCCGTA
AAACGTGGCG CTTGCGGCGG TTGCTTCAAC ACTGTTCCAC CACAACGTCA AGGTGAAATC
CGTGAAAGAA AGAAGATCAT TGTATGTGAA CACTGCGGTC GTATTTTAGC GAACGTTGAA
TTTGTAATGG AACCGATCAA AAAATAA
 
Protein sequence
MEQSTIAQKL DALVKLQSID SKLDEIIKVR GDLPEEVRDL EDELAGYETR LTKHEGEINT 
LEESIKNFKN GIKESEKLIK KYEEQQKNVR NNREFDAISK EVELQQLEIQ VSEKRIKEAL
QQIEFKKEEI KKTDYNLSER KKDLENKKQE LEVIVSESQD EEVKLNKERE KASKQIEERL
LNSYTKLVNN YRNGLAVVSV KRGACGGCFN TVPPQRQGEI RERKKIIVCE HCGRILANVE
FVMEPIKK