Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1806 |
Symbol | |
ID | 4185032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2120340 |
End bp | 2121086 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638071805 |
Product | hypothetical protein |
Protein accession | YP_678415 |
Protein GI | 110638206 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0177003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.791252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAT CTACAATCGC TCAAAAATTA GATGCTTTAG TCAAGCTTCA ATCAATCGAC TCAAAATTAG ATGAAATCAT CAAAGTAAGA GGAGACCTTC CTGAAGAAGT AAGAGACCTG GAAGATGAAT TAGCTGGCTA TGAGACCCGT TTAACCAAGC ATGAAGGTGA AATTAATACG TTAGAAGAAA GTATTAAAAA CTTCAAAAAC GGAATTAAAG AATCCGAAAA ACTTATAAAG AAATACGAAG AGCAGCAAAA AAACGTGCGT AACAACCGTG AGTTTGATGC AATCAGTAAA GAAGTAGAGT TACAGCAGTT AGAGATTCAG GTTTCTGAAA AAAGAATTAA AGAAGCATTG CAGCAGATTG AATTCAAAAA AGAAGAAATC AAAAAAACGG ATTACAACTT AAGCGAACGT AAAAAAGACC TTGAGAACAA GAAACAGGAA TTAGAAGTAA TCGTTTCTGA AAGTCAGGAT GAAGAAGTTA AATTGAACAA AGAACGCGAA AAAGCTTCAA AGCAAATTGA AGAGCGTTTA TTGAACTCAT ATACAAAATT AGTTAACAAT TACCGTAACG GACTTGCTGT AGTATCCGTA AAACGTGGCG CTTGCGGCGG TTGCTTCAAC ACTGTTCCAC CACAACGTCA AGGTGAAATC CGTGAAAGAA AGAAGATCAT TGTATGTGAA CACTGCGGTC GTATTTTAGC GAACGTTGAA TTTGTAATGG AACCGATCAA AAAATAA
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Protein sequence | MEQSTIAQKL DALVKLQSID SKLDEIIKVR GDLPEEVRDL EDELAGYETR LTKHEGEINT LEESIKNFKN GIKESEKLIK KYEEQQKNVR NNREFDAISK EVELQQLEIQ VSEKRIKEAL QQIEFKKEEI KKTDYNLSER KKDLENKKQE LEVIVSESQD EEVKLNKERE KASKQIEERL LNSYTKLVNN YRNGLAVVSV KRGACGGCFN TVPPQRQGEI RERKKIIVCE HCGRILANVE FVMEPIKK
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