| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1793 |
|---|
| Symbol | pyrC |
|---|
| ID | 4184689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 2101857 |
|---|
| End bp | 2103122 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638071792 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_678402 |
|---|
| Protein GI | 110638193 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.823522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.801075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGACTA TTGTTATACG TTCTGCTGAA ATAGTTGATT CGACCTCCGA GTTGAATGGG
AAAATCCGTT CCATATTGAT TGAAAATGGA ATCATAAAAA AAATAAGTGA CAAGGAATTG
TCTGCCGATA CAGTTATTGA AGCTAAAGGA ATGAAAGTTT CCCTGGGGTG GATGGATATG
CGGGTAACGA CAGGCGATCC CGGCCATGAA TACAAAGAAG ATCTGAACTC TGCTTGCAAT
GCGGCTATGC AGGGCGGTTT TACGGCCATT GCAGTGTTGC CGAATACAAC TCCGCCCATG
CAATCAAAAG AATCTGTAGA ATATGTAAAA GGGAAGACCC GCGAAAAACT GGTGGATGTT
TATCCGATTG CGGCTTTAAC CCTGAATAAT AAAGGCGAAG AGCTGACGGA GATATTAGAT
ATGAATGCCT CTGGTGCTAT TGCCTTTTCA GATGGTGTAA AACCGATCTG GCATTCAGAT
TTATTGTTAC GTGCGTTACT CTACATGCAG CCGATCAATG CACAACTGAT TGTACATGCA
GAAGACAAAT ACCTGAGCCA CGGCGGACAA ATGAATGAAG GGAAAACAAG TACAATGCTG
GGCTTGAAAG GAATTCCCAA ACTGTCTGAA CAGATTATGG TAGATCGTGA CCTGTCTATT
CTTGAATACA CGGGAGGTAA AATTCATTTT GCACATATTT CAAGCCCCAA ATCGTTGGAG
CTGATAAAAG AAGCTAAGAA AAAAGGATTG AATGTTACGT GTGATATCGC TTCTTATCAG
CTGGCGCTGG ATGATACGAT GCTTTCTTCT TTTGATTCAA ATTTAAAAGT AAATCCTCCG
CTGCGTTCCA AGCGTGATAT TGATGTGTTC TGGAAATACA TTAATGACGG AACCGTTGAC
GTAATTGTTT CAGATCATAT TCCGCAGGAT ACAGAATGCA AGCAACTGGA ATTTGACCAG
GCAGACTTTG GTATGATTGG TCTGGAAACC ATGTTCAGCG TAGTGAATAC GTACAACACA
AAGATTGAAC TGGCAAAGAT AATTGAAAAA ATCACTGTTG CACCACGTGC AGTTTTAAAT
ATTAACGTGC CTCAGCTTAA GGAAGGTGCT AAAGCAAACC TTACTGTTTT TGATACGGAA
AAGGAATGGA TACTAAGTGC AGCTGATTTA CGTTCTAAGT CGGTAAACAC GCCTTTTATT
GGTAAGAAAA TGAAGGGCAG AGCTGTGGCT GTTATTAATA ACAATCAATT GACCTACGTA
AGGTAA
|
|---|
| Protein sequence | MGTIVIRSAE IVDSTSELNG KIRSILIENG IIKKISDKEL SADTVIEAKG MKVSLGWMDM
RVTTGDPGHE YKEDLNSACN AAMQGGFTAI AVLPNTTPPM QSKESVEYVK GKTREKLVDV
YPIAALTLNN KGEELTEILD MNASGAIAFS DGVKPIWHSD LLLRALLYMQ PINAQLIVHA
EDKYLSHGGQ MNEGKTSTML GLKGIPKLSE QIMVDRDLSI LEYTGGKIHF AHISSPKSLE
LIKEAKKKGL NVTCDIASYQ LALDDTMLSS FDSNLKVNPP LRSKRDIDVF WKYINDGTVD
VIVSDHIPQD TECKQLEFDQ ADFGMIGLET MFSVVNTYNT KIELAKIIEK ITVAPRAVLN
INVPQLKEGA KANLTVFDTE KEWILSAADL RSKSVNTPFI GKKMKGRAVA VINNNQLTYV
R
|
|---|
| |