| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1786 |
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| Symbol | pnp |
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| ID | 4184682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2093981 |
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| End bp | 2096134 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071785 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_678395 |
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| Protein GI | 110638186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.062273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTACC CTGGATTAAC AATCATAAAT AAAACCATAA CCTTACCTGA CGGTAGAGAA
ATTCAAATTG AAACGGGCAA GCTTGCAAAA CAGGCAGACG GTTCAGCAGT TGTTAAATTA
GGAAACGCAA TGATTTTAGC AACGGTTGTT TCTGCTAAAG AAGCTAAACC AGGTGTTGAC
TTCATGCCTT TGTCTGTAGA TTACCAAGAG AAATTTGCTT CTAACGGAAA AATCCCCGGT
GGTTTTTTGA AAAGAGAAAG CAGATTATCC GATTATGAAA TATTGATTTC CCGCTTAGTG
GATCGCGCTA TGAGACCTTT ATTCCCGGAG GATTTTCATG CAGATACACA GGTTGCTATA
ACATTGATCT CTGCTGATGC AGATGTTTTG CCGGATGCAT TGGCATGCCT TGCTGCACAA
GCAGCCATGT CTGTTTCGGA TATTCCATTC AATGGTCCGG TTTCTGAAGT TCGTGTAATT
TCATTAAACG GAGAATTCAT TATCAACCCG AAGCCTGCTC AGATAGAAAA GGCTGAATTG
GAACTTATCG TTGCGGCTTC TTATGATAAC GTTATCATGG TAGAAGGTGA AATGAGCGAA
GTATCTGAAG AGCTAATGCT GAATGCTATT AAGGTAGCAC ACGATGCAAT CCGTACTCAG
TGTATCGTAT TAAAAGAACT GGAATCTGCT GCAGGTAAAA CTGAAAAACG TACTTATAGT
CATGAAGTTA ATGACTGGGA TTTAAAGAAA AAAATTAATG ATGCTGTATA TCAGCAAGTG
TATGAGGTTG CTAAGTTAGG CAATGCAAAT AAAAATACAC GTGCTGAAGG ATTTAAAGCA
GTTAAAAAAG CTTATATCGA ATCACTTCCG GCAGATCATA CAGAAGATTT AACCTTAATT
GGTAAATACT ACCACGATGT TGAAAAAGAT GCTGTCAGAA ATCTTATTTT AGATGAACGT
AAGCGTTTAG ATGGAAGAAG CTTAGAGCAG ATCCGTCCGA TCTGGTCTGA AGTTGGTTAT
TTACCATCTG CACACGGTTC TGCAATCTTT ACACGTGGTG AAACACAATC ATTAACTACT
GTTACATTCG GTACCAGACT GGATGAACAA ATGATTGACA GCGCTATGTT CTCAGGTAAC
AACAAATTGA TGTTGCACTA TAACTTCCCG GGTTTCTCAA CCGGTGAAGT GAAACCAAAC
AGAGGTCCAG GCCGTCGTGA GGTAGGACAT GGTAACCTTG CTTACCGTGC CATTAAAAAA
GTAATGCCGC CGGAAATTGA AAATCCATAT ACGATCCGTA TCGTTTCTGA TATTCTTGAA
TCAAATGGTT CGTCTTCTAT GGCAACTGTT TGTGCAGGTA CATTAGCATT AATGGATGCG
GGTATTAAAA TCAAAGCACC TGTTTCAGGT ATTGCAATGG GTTTAATTAC CGACACTAAA
ACAGGTCGTT GGGCAGTATT ATCTGATATC TTAGGCGATG AAGATCACTT GGGTGACATG
GATTTTAAAG TTACAGGTAC TGAAAAAGGT ATTACGGCTT GCCAGATGGA TATCAAAGTA
GATGGTTTAT CATACGATAT TTTATCTCAA GCATTACAGC AGGCAAATAG AGGCAGATTG
CACATCCTCA GCGAGATGAA GAAGACACTC GCTACACCTC GTGAAGATTT AAAACCACAT
GCGCCACGTA TGATCATGAT TCAGATTCCA AAAGAACTGA TCGGTGCGGT AATCGGGCCA
GGCGGTAAAA TTATTCAGGA AATTCAGAAG ACTTCCGGAG CTACAGTTAA CATAGAAGAA
AAAGACAACG CGGGTTGGGT TAGTATCTTC TCTAAAGACA AGACAGCTTT GGACAGCGCT
TTATCACAAA TAAAAGGAAT TGTAACATTA CCTGAAGTAG GTGAAGTATA CGAAGGCAAA
GTGAAATCAA TCACAGCATT TGGTGCATTC GTTGAGTTCT TGCCAGGAAA AGACGGTTTG
TTACACATCT CTGAAATTAA GTGGGAGCGT TTGGATACAA TGGAAGGTGT TTTAGAAGTT
GGTGAAACGG TTAAAGTAAA ATTGGTTGAA GTAGACAAAA AAACAGGTAA GTATCGTTTA
TCCCGGAAGG TATTGATACC AAAACCTGAG CAGCAGGCTA CATCCAATTC ATAA
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| Protein sequence | MSYPGLTIIN KTITLPDGRE IQIETGKLAK QADGSAVVKL GNAMILATVV SAKEAKPGVD
FMPLSVDYQE KFASNGKIPG GFLKRESRLS DYEILISRLV DRAMRPLFPE DFHADTQVAI
TLISADADVL PDALACLAAQ AAMSVSDIPF NGPVSEVRVI SLNGEFIINP KPAQIEKAEL
ELIVAASYDN VIMVEGEMSE VSEELMLNAI KVAHDAIRTQ CIVLKELESA AGKTEKRTYS
HEVNDWDLKK KINDAVYQQV YEVAKLGNAN KNTRAEGFKA VKKAYIESLP ADHTEDLTLI
GKYYHDVEKD AVRNLILDER KRLDGRSLEQ IRPIWSEVGY LPSAHGSAIF TRGETQSLTT
VTFGTRLDEQ MIDSAMFSGN NKLMLHYNFP GFSTGEVKPN RGPGRREVGH GNLAYRAIKK
VMPPEIENPY TIRIVSDILE SNGSSSMATV CAGTLALMDA GIKIKAPVSG IAMGLITDTK
TGRWAVLSDI LGDEDHLGDM DFKVTGTEKG ITACQMDIKV DGLSYDILSQ ALQQANRGRL
HILSEMKKTL ATPREDLKPH APRMIMIQIP KELIGAVIGP GGKIIQEIQK TSGATVNIEE
KDNAGWVSIF SKDKTALDSA LSQIKGIVTL PEVGEVYEGK VKSITAFGAF VEFLPGKDGL
LHISEIKWER LDTMEGVLEV GETVKVKLVE VDKKTGKYRL SRKVLIPKPE QQATSNS
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