Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1778 |
Symbol | trxB |
ID | 4186850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2084752 |
End bp | 2085699 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071777 |
Product | thioredoxin-disulfide reductase |
Protein accession | YP_678387 |
Protein GI | 110638178 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.246241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00675935 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCAGTAG AAAAAGTACA TTGTCTAATT ATCGGTTCAG GTCCTGCAGG ATATACTGCA GCGATATATG CTTCTCGTGC AGGTTTAAAG CCTGTCATGT ATCAGGGTGC TCAGCCAGGT GGTCAGTTAA TGATCACAAA TGACGTTGAG AACTTCCCGG GATATCCGGA TGGCGTAATG GGGCCGGAGA TGATGGAACA TTTTAAGGCA CAGGCTACAC GTTTTGGTGC AGATATTCGT TATGGTACTA TCAGTTCGGT AGATTTTACC GGTCCGGTTC ATAAAGTAAC TGTTGATGAA AAGGTAGTAC TGGAAGCGGA TACAATCATT ATATCTACCG GAGCAGGAGC TAAATGGCTG GGTATTGAAT CTGAAACACG TTTGAATGGC CGCGGTGTTT CTGCCTGCGC TGTCTGTGAC GGATTCTTTT TCCGGGGACA GGAAGTTGCA ATTGTAGGTG CAGGTGATAC GGCTTGTGAA GAAGCGAGTT ATTTATCAAA GCTTTGCAAA AAAGTATATA TGCTGGTACG TAAAGATAAA TTCGTTGCCG CCTCGGTTAT TATGCAGCAA CGTGTATTAA ATACACCAAA CATTGAAGTG CTGTTCAGTA CAGAAACAGA TGAAATTTTA GGTAAAGAAG ATGTGGAAGG CATGCGCGTG AGAAACAATG TTACGGGGGA AACACGTGAA ATTCCGGTAA CAGGTTTCTT CGTAGCGATC GGTCACAAAC CCAATACAGA TATTTTCAAA GGATGGATTG ATATGGATGA AAATGGTTAT ATCAAAACAA TTCCGGGAAC ATCTAAAACA AACGTCGAAG GTGTATTTGC TTGTGGAGAT GCACAGGATC ACGTATACCG CCAGGCAGTT ACAGCAGCCG GTACAGGCTG TATGGCAGCC TTAGATGCAG AAAGATATTT AGCAGCAAAA GAAGCTGTCA CCGCGTAA
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Protein sequence | MSVEKVHCLI IGSGPAGYTA AIYASRAGLK PVMYQGAQPG GQLMITNDVE NFPGYPDGVM GPEMMEHFKA QATRFGADIR YGTISSVDFT GPVHKVTVDE KVVLEADTII ISTGAGAKWL GIESETRLNG RGVSACAVCD GFFFRGQEVA IVGAGDTACE EASYLSKLCK KVYMLVRKDK FVAASVIMQQ RVLNTPNIEV LFSTETDEIL GKEDVEGMRV RNNVTGETRE IPVTGFFVAI GHKPNTDIFK GWIDMDENGY IKTIPGTSKT NVEGVFACGD AQDHVYRQAV TAAGTGCMAA LDAERYLAAK EAVTA
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