Gene CHU_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1748 
Symbol 
ID4184838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2055604 
End bp2056644 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content43% 
IMG OID638071747 
Productacyltransferase 
Protein accessionYP_678357 
Protein GI110638148 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0196433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.549276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCAC ATTATCCGAT CCTTGACGGA CTGCGGGGAA CGGCAGCGCT TCTGGTTGTT 
ATTTTCCACC TCTTTGAAGC ATCGTTTCCT GTTTACACAG ACAACCCAAT GCATCACGGC
TATCTGGCAG TAGATTTCTT TTTTCTGCTA TCCGGCTTTG TAGTGGCTTA TGCATACGAC
GACCGCTGGG AGTACATGTC TGTTATTGAT TTCTTTAAAA TACGGTTTGT CCGTCTGCAT
CCGCTCGTTA TGTTAAGTGT GGTAATCAGT GTGCTTGCTT TCGCACTGGA TCCTTATAAT
AATTCAGAAC AGATACCTGC ATTGAAGATT ATTGGTGTAA CGCTGCTTAC TTTTACCTTA
TTGCCAACAC CGGATCTTCG CGGCTGGGGC GAAACACATA CCCTCAACGG TCCGCTGTGG
TCGCTGTTTC AGGAATACAT GGCAAACATA TTCTATGCGT GGTTCGGACA TCGCATCGGT
ATAAAGTTGT TGTGGGGGCT CGTACTTATA AGCGCTTGTG TATTGACCGC AACATCTATT
CATCATGGTG ATATCGGTAC GGGCTGGAGT TATGAGACGT TCTGGATCGC CTTTGTACGT
ATGGTATTTC CATTCTTAGC TGGCATCCTG TTATTCCGTT CCCGTAAATT AATTCGCATT
CCGATGGCGT ATGCCATTTG TTCTGCATTG CTCTTTTTTC TTTTCAGCCT TCCGGTGTTT
GCGTATAACG GCCTTTATGA TGCGGTGTGT ATTATCTTTG TTTTTCCATT TATTATTGCT
GCCGGTGCAG GTGGCACGAT AAGCGGTAAG TGGGCGAAGG TATGCAAATT CTCCGGCGAT
ATTTCGTATC CGATTTATAT TATTCATTAT CCATTTATAT ATATTTATAC GTCGTGGGTT
GGAATAAAAA AACCTGCGCC GACGGAGCTC TTTGCGGTTG GTTCAGGACT TTTTATACTT
TTTATTGTGC TGGCGTTTGC TGCATTAAAA TTATATGATG AGCCCTTCAG AGCGTGGCTT
AAAAAAAGAA TATTAAAATA A
 
Protein sequence
MRPHYPILDG LRGTAALLVV IFHLFEASFP VYTDNPMHHG YLAVDFFFLL SGFVVAYAYD 
DRWEYMSVID FFKIRFVRLH PLVMLSVVIS VLAFALDPYN NSEQIPALKI IGVTLLTFTL
LPTPDLRGWG ETHTLNGPLW SLFQEYMANI FYAWFGHRIG IKLLWGLVLI SACVLTATSI
HHGDIGTGWS YETFWIAFVR MVFPFLAGIL LFRSRKLIRI PMAYAICSAL LFFLFSLPVF
AYNGLYDAVC IIFVFPFIIA AGAGGTISGK WAKVCKFSGD ISYPIYIIHY PFIYIYTSWV
GIKKPAPTEL FAVGSGLFIL FIVLAFAALK LYDEPFRAWL KKRILK