Gene CHU_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1738 
Symbol 
ID4183919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2043819 
End bp2045555 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content33% 
IMG OID638071737 
Producthypothetical protein 
Protein accessionYP_678347 
Protein GI110638138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.568189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.233256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCT TTATTAATTT AATAAAATTA TTTCTTGTTG AACTTCTTAT TATTTTTTCT 
GTCGTTATTA TAATAAACAA ATTTGTAGGC AACACTAAAA CAACAATAAA AGCGGATGCT
GAAGGCTATT ATGATTACCT TCCGTCGATT TTTATTCATC ATGATCTGGT GAGATTATCT
GCTCCCAAAG ATCAAAATCC GCAACTGTAT AACCGTATCA ATAACCGCCC GTATAACGAT
TACGAAAAAT TTAAAGTCAA CAAATATCCG TGCGGAACAG CTATCCTGCA ACTCCCCTTC
TTCACCTATA CGCTACTGTT CAATGCCGAT CTTGAGAACA ACGATATGGA TGGATATCAG
TATGTTTTTC ACCGGTCTAT TTTCTTTGCT GCACTTACGT ATTTGTTTTT AAGTCTTATT
TTCCTGAAAA AAATTCTAGA AACATATTCC ATTAAGACAT ACATTATTAT TTTAACACAG
GTACTGGTTG CCCAGGCCAC TTTACTGATC AATTATGTAA ATTATGATGC AGGCTTTAGT
CATGTGTATT CATTGTTTGC GATAACAGCG TTCTGCTATT TTACTATTCA GTATTTTAAA
ACACATCAAA TAAAGTATGT TCTTATTACC TGTGTGTTTT TAGGATTAAT TTTGCTGCTA
AGACAAATTA ATCTTCTCAT TATTTTAGCT ATTCCTTTTT TAGCAGGCTC GGCTGAAAAT
TTAAGAACAG GAACAATGCT GCTCTTTTCC CAGTATAAAA AATTACTTAT TGGTCTATTA
CTTGTAATTG GAGTTTTTTC GATTCAATGT ATTCTTTGGT ACCTTCAAAC AGGACATTTC
TTTGTTTATT CATACCAAGG CGAAGGTTTT GACTTTACAA ATCCAAAATT CATCGATATT
TTATTTAGCT ATAAGAAAGG CTTATTTGTA TATACGCCGG TATTATTTAT CTGTTTATCC
GGATTGGGAT TATTTCTGTT TAAACGCAAT TACTATTTAT TTTTCACCTG GCTCACGTTT
TTTGTGATCC TAACCTACAT TCTTTCATCC TGGCATTCAT GGTATTATGG AGCAAGTTAT
GGACTCAGGG CATACATTGA TTTTTATCCC TTGTTTTTCA TTTTACTTGC CTGTTTTTTA
AATGAAGCGT CAATGCTCTC AAAAAGTATT TGTGTGGTAC TATGCCTGAT AACGATTCCA
GTCAATATTA TTCAAACGTA CCAGTATAAA GAAAACATAC TTCATTGGTA TGAAATGGAT
AAGAACAAAT ACTGGAAAGT GTTTTTAGAA ACAGATGATG CCTTTAGAGG TATTTTATGG
CAAAAAGAAT ATGATTATGA CAACTATGCT CTTGTTAAGG AAATAGCGTT AGGAGATATT
TATACAACTA AAAATACCAC CAATCTGGTC CTAAAGATCA ATAGCGCCGA GATCCCTGAT
TTTAACAACG TGCGTATTGT GCAAGCATTG GCTTACGATG ATTTTAAAAC CGATAACCGC
TCTAAATTGG TGTTGTGGAT ACAAGACTCA ACCAATAATA AAAATCTCTA TTGGAATGAC
GCCAATCTCT TACATTTTCC GGAAAGAAAG TTTAATGATT GGCAAACAGG TATTTATAAT
TATGAATTTA TTATACCTAA TGACGAAACC ATAAAAACGA TAGGATTTGA AGTAAAGACC
GCCGAGCAAG GATGTGATCT GAAGAATATG CGTTTACGGT TTTTAAAGTT GAGATAG
 
Protein sequence
MHTFINLIKL FLVELLIIFS VVIIINKFVG NTKTTIKADA EGYYDYLPSI FIHHDLVRLS 
APKDQNPQLY NRINNRPYND YEKFKVNKYP CGTAILQLPF FTYTLLFNAD LENNDMDGYQ
YVFHRSIFFA ALTYLFLSLI FLKKILETYS IKTYIIILTQ VLVAQATLLI NYVNYDAGFS
HVYSLFAITA FCYFTIQYFK THQIKYVLIT CVFLGLILLL RQINLLIILA IPFLAGSAEN
LRTGTMLLFS QYKKLLIGLL LVIGVFSIQC ILWYLQTGHF FVYSYQGEGF DFTNPKFIDI
LFSYKKGLFV YTPVLFICLS GLGLFLFKRN YYLFFTWLTF FVILTYILSS WHSWYYGASY
GLRAYIDFYP LFFILLACFL NEASMLSKSI CVVLCLITIP VNIIQTYQYK ENILHWYEMD
KNKYWKVFLE TDDAFRGILW QKEYDYDNYA LVKEIALGDI YTTKNTTNLV LKINSAEIPD
FNNVRIVQAL AYDDFKTDNR SKLVLWIQDS TNNKNLYWND ANLLHFPERK FNDWQTGIYN
YEFIIPNDET IKTIGFEVKT AEQGCDLKNM RLRFLKLR