Gene CHU_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1702 
Symbol 
ID4184927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2002541 
End bp2002882 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content33% 
IMG OID638071700 
Productanti-anti-sigma regulatory factor 
Protein accessionYP_678311 
Protein GI110638102 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.39095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA ATACTTATAT CAAAGAAAAC ATATTGTTCC TTCAGCTTGA AGGCGATTTG 
ATAGGTGAAA GTAATGGCTT GGAACTAATG GATTTAGTTA GTGAGAAATT AAATGAAAGT
ATCACACGTT GTGCAATTGA CTTGTCATTG GTACGCTATA TGAACAGTAG CGGTATTGGT
GTATTAATTA CGTTGTTAAC GAAGTTCAGA AACAAAGGTG GAGAATTGGT TCTGATCAAT
CCTTCCGAGC AGATCAAAAA ATTATTGATC ATCACAAAAT TGAACTCAAT ATTTGTAATT
GTTGAGACAG AAGCAGAAGC ATTAGAGAGA TTAACAAAAT AA
 
Protein sequence
MKYNTYIKEN ILFLQLEGDL IGESNGLELM DLVSEKLNES ITRCAIDLSL VRYMNSSGIG 
VLITLLTKFR NKGGELVLIN PSEQIKKLLI ITKLNSIFVI VETEAEALER LTK