| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1639 |
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| Symbol | gyrA |
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| ID | 4187016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1919006 |
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| End bp | 1921585 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071632 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_678249 |
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| Protein GI | 110638041 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.489152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0780905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG ATATTAATAA TAATTCATCA GAAGAACAAT CAGGTAACGA GCATATACAT
GATGTAGTGC ATGTTAACGG TTTATATGAA AACTGGTTTT TAGAATATGC ATCCTATGTA
ATTCTTGAAA GAGCAGTTCC GCATATCAAT GATGGACTAA AACCTGTTCA GCGAAGAATT
CTCCATGCCA TGAGAGTTAT GGATGACGGC AGGTTTAATA AAATTGCCAA TGTGATTGGT
TCAACCATGC AGTATCACCC GCACGGCGAT GCATCGATCG GGGATGCCAT TGTAAACATG
GGGCAGAAGG ACCTGTTGAT CGAACCACAG GGAAACTGGG GTGATATACG CACCGGAGAC
AGTGCGGCGG CACCCAGATA CATTGAAGGC CGCTTATCAA AGTTTGCACT GGATGTAGTT
TTCAATGAAG ATACTACAGA ATGGCAGGCA TCATACGATG GGCGTAAAAA GGAACCGGTT
ACACTACCTG TCAAATTTCC GTTGTTATTG GCACAAGGAG TAGAAGGAAT TGCCGTAGGT
TTGTCCACCA AAGTATTACC GCACAACTTT GTTGAACTTA TAGAAGCTTC TATTGCTGTA
TTGAAAAATA AAAAATTCGA GATTTTCCCG GACTTTGCAA CGGGAGGTTT TATAGATGTA
AGTAATTATA ATGAAGGCCA GAAGGGAAGC CGCGTACGTG TTCGTGCACG TATTGAGGAT
ATGGATAAGA AGACACTTGT CATTAAAGAT ATTCCTTTCG GAACTACAAC AACTTCACTG
ATCGAATCGA TCGTTAAAGC AAACGATACC GGTAAGATCA AGATTAAAAA AGTAATCGAC
AATACAGCGA AGGATGTAGA AATACAGGTG CAGTTATTAC CCGGTACAGA TCCTGGTATT
ACGATAGATG CCTTATATGC ATTCACGGAA TGTGAAAGTT CTATTTCACC TAATGCATGT
GTAATTGTAG ATGATAAACC GCATTTCTTA AGTGTTCATG AAATACTTCG TATCTGCACA
CGCCAGACGG TTGACCTGTT AAAGCAGGAA TTACAGATCC GCAGAAGTGA ATTGCTGGAA
CGTATTTTAT TTTCTTCGTT AGAAAAGATA TTTATTGAAA ATAGAATCTA CCGGAAAATT
GAAGAGTGTG AAACGTGGGA AGATGTACTT CTTACGATTG ACAAGGGGTT ACAGCCATTC
AAAAAGCAAT TTTACAGAAC CATTACGACA GAAGATATTG TTCGTTTAAC GGAAATAAAA
ATCAAACGTA TCTCCAAATT TGATTCCTTC AAGGCAGATG AACTGATGCG TGGTTATTCA
AACGAGTTAA AAGAAGTTGA ACACAACCTT GAAAACATCA TTGATTATTC AATAGCATAC
TATACAGGTA TTTTAAAGAA ATACGGTAAA GGAAGAGAGC GTAAAACAGA AATCAAAACA
TTTGACGTTA TTAATGCAAC TGTTGTGGCA GCAAACAATC AAAAGCTGTA TATCAACAGA
GCAGAAGGAT TCATAGGCTT TGGGCTGAAA AAAGATGAAT ACATTTGTGA TTGCTCTGAT
ATAGATGATG TAATTGTTTT CAGACGCGAT GGTATTTGTG TGGTAAAGAA AATAGGAGAG
AAGGTATTTG TTGGTAAAGA CATTCTTTAC GCAGGTATTT TCAGAAAAGG AGATGACCGT
ATGGTCTATA ACCTTATTTC CCTTGACGGT GCCAGCGGTA ACAGCATGGT GAAACGTTTC
AATGTAATGG GCGTAACACG TGAAAAAGAA TATCCGCTTG TAAAAGCTAA TAAAGCTTCT
AAAGTCCTTT ATTTTTCGGC CAATCCAAAT GGAGAAGCAG AAACCGTGAG TGTTACATTA
ACTCCTACCA GCAAAGCAAA AATAAAAGTA TTTGATTTCG ATTTCAGTAC TATTGAGATT
AAAGGCAGAG ATACGCAAGG GAACATCCTG ACTAAACACC CTGTAAAAAA GGTAACGTTT
AAAGCTGCAG GTGAATCTAC GCTGGCTGGT ACAGAAATTT ATTACGATGA AACCATAGGC
AGGATCAATA CCGACAAAAA AGGATTACTG ATTGGTTCAT TTGCATCCGA AGATAAAATC
TTAGCTACCT ACAAAGATGG TACCTATGAA GTAACGGGTT TTGAACTTAC AAACAGGTAT
GATGCGGATC AGCTGCTTTC CATCGAAAAG CACAATCCCG AAGCAATCGT TTCAGCGCTT
TATCTGGATG CTCCTTCAAA AACATACTAT ATTAAACGTT TTAAGTTAGA AACAACCACC
TTGGGCAAAC GTTTTGCGTT TATTCCGGAT GGTAAAGGAA ATCAGGTTTT ATTCATTTCT
ACCGATGATA AGCCTAAAAT CAAGATCGAT TTCGCTAAAG GCAAATATGT GACTAATCCA
ACAATGATTG TTTCAATAGA TGAATTCTCT GAAATAAAAG GCTGGAAATC AATTGGTAAC
AAATTAGGAA CAAATAAAAT AAATTCAATT TCAAGATTAG AAGCAAAAAA AACAGCTGAA
AAACCTAAAA AAGACGACGG TTATGTGGCA GGATCAACAA TTGAATTGAA TTTTAATTAA
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| Protein sequence | MAKDINNNSS EEQSGNEHIH DVVHVNGLYE NWFLEYASYV ILERAVPHIN DGLKPVQRRI
LHAMRVMDDG RFNKIANVIG STMQYHPHGD ASIGDAIVNM GQKDLLIEPQ GNWGDIRTGD
SAAAPRYIEG RLSKFALDVV FNEDTTEWQA SYDGRKKEPV TLPVKFPLLL AQGVEGIAVG
LSTKVLPHNF VELIEASIAV LKNKKFEIFP DFATGGFIDV SNYNEGQKGS RVRVRARIED
MDKKTLVIKD IPFGTTTTSL IESIVKANDT GKIKIKKVID NTAKDVEIQV QLLPGTDPGI
TIDALYAFTE CESSISPNAC VIVDDKPHFL SVHEILRICT RQTVDLLKQE LQIRRSELLE
RILFSSLEKI FIENRIYRKI EECETWEDVL LTIDKGLQPF KKQFYRTITT EDIVRLTEIK
IKRISKFDSF KADELMRGYS NELKEVEHNL ENIIDYSIAY YTGILKKYGK GRERKTEIKT
FDVINATVVA ANNQKLYINR AEGFIGFGLK KDEYICDCSD IDDVIVFRRD GICVVKKIGE
KVFVGKDILY AGIFRKGDDR MVYNLISLDG ASGNSMVKRF NVMGVTREKE YPLVKANKAS
KVLYFSANPN GEAETVSVTL TPTSKAKIKV FDFDFSTIEI KGRDTQGNIL TKHPVKKVTF
KAAGESTLAG TEIYYDETIG RINTDKKGLL IGSFASEDKI LATYKDGTYE VTGFELTNRY
DADQLLSIEK HNPEAIVSAL YLDAPSKTYY IKRFKLETTT LGKRFAFIPD GKGNQVLFIS
TDDKPKIKID FAKGKYVTNP TMIVSIDEFS EIKGWKSIGN KLGTNKINSI SRLEAKKTAE
KPKKDDGYVA GSTIELNFN
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