| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1615 |
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| Symbol | ybgR |
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| ID | 4187091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1895396 |
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| End bp | 1896301 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638071608 |
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| Product | cation transporter, permease component |
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| Protein accession | YP_678225 |
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| Protein GI | 110638018 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0151047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0448748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACGAA CTAAAAGCAA AAAAGAATAT CATACATTGC TGTTTTCATT TTCCATGATT
ATAGCGTTAA TGATTTGCAG TTTGGTTTTC AATGAACTTA CAGAATCCAA TATCATTGAA
GTAGATGCCG GCTCTTATGT TATCAGCGCC ATTATTGGAC TTGTAACCAT TTATATTTCA
AAATTAAAAG ACAGACCAAA AGATGAGGAT CACCCGCTGG GTTTTTCAGG TTATGTACCA
ATCTTAAATC TGATCCGCAG CTTCATGATC ATTTTAATAT GTATCAAAGC AATCGGTGAA
TCGCTCGGCA GCATATACAG CGGACCTCCG GAAACAGACC ACAAAATCAT GTTCAGCTAT
GCATTGATCA CCTCTGTATT TAATATGATT GCTTTTTTTA TTATAAGCCA TAAAGGAAAA
CAACTCGATT CTGCATTATT GAAAACCGAT GCACTGGAAT GGAAAACAGA TATTGCGTTT
AATATATCCA TTATCCTGGC TATTGTCTTA TCATACGGGC TTACGTTTAC TTCATTTAAA
GAATATGGGA ATTACATAGA TCCGGTATTT TGTATTGTTT TTTCAATCGC TATGGCATAT
TCACCGGTTA TGTTATTCTC TGAAAATGTA AAACTCCTGT CTGTATCATC TATTGATAAA
GAGCTGCAGC AACAGGTTAT TCGTGCATTT AAAGAGAAAC TGTCTATTCT TGAACAATAT
CAGGCAAAGT TTACCGTGCT GCATATAGGA GGGGTCTTAT GGGTAAATAT TGAACTGGAA
GTACCGGTAA CGAGCCAGGA TATCACACGC GATTATCTCA TCATTAAAAC TACAGGCGAA
GGAATACTGA ATCAGATCAC TCCAGACAAT AAAATTTCCT TTTTGATAAA CCGCATCAAA
GAATAA
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| Protein sequence | MIRTKSKKEY HTLLFSFSMI IALMICSLVF NELTESNIIE VDAGSYVISA IIGLVTIYIS
KLKDRPKDED HPLGFSGYVP ILNLIRSFMI ILICIKAIGE SLGSIYSGPP ETDHKIMFSY
ALITSVFNMI AFFIISHKGK QLDSALLKTD ALEWKTDIAF NISIILAIVL SYGLTFTSFK
EYGNYIDPVF CIVFSIAMAY SPVMLFSENV KLLSVSSIDK ELQQQVIRAF KEKLSILEQY
QAKFTVLHIG GVLWVNIELE VPVTSQDITR DYLIIKTTGE GILNQITPDN KISFLINRIK
E
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